RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 ATP6V1E2Q96A05 226 aa12.79□□□□□ -0.36
LINC01088-201ENST00000437737 GSTO2Q9H4Y5 243 aa12.79□□□□□ -0.36
LINC01088-201ENST00000437737 RPF2Q9H7B2 306 aaKnown RBP12.79□□□□□ -0.36
LINC01088-201ENST00000437737 DNAJC11Q9NVH1 559 aa12.79□□□□□ -0.36
LINC01088-201ENST00000437737 FGFR1OP2Q9NVK5 253 aa12.79□□□□□ -0.36
LINC01088-201ENST00000437737 HAO1Q9UJM8 370 aa12.79□□□□□ -0.36
LINC01088-201ENST00000437737 ZNF490Q9ULM2 529 aaPredicted RBP12.79□□□□□ -0.36
LINC01088-201ENST00000437737 C2orf92A0A1B0GVN3 265 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 OR6C76A6NM76 312 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 ITM2AO43736 263 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 SMNDC1O75940 238 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC01088-201ENST00000437737 CHEK2O96017 543 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 FGF4P08620 206 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 PTPN6P29350 595 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 RPL14P50914 215 aaKnown RBP12.78□□□□□ -0.36
LINC01088-201ENST00000437737 SLC37A1P57057 533 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 KRTAP1-1Q07627 177 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 HIST2H2ACQ16777 129 aaPredicted RBP12.78□□□□□ -0.36
LINC01088-201ENST00000437737 SPRED3Q2MJR0 410 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 HLA-DQA1Q5Y7H0 255 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 HIST2H2AA3Q6FI13 130 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 SCIMPQ6UWF3 145 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 ENPP6Q6UWR7 440 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 PLEKHM3Q6ZWE6 761 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 ST13P4Q8IZP2 240 aaPredicted RBP12.78□□□□□ -0.36
LINC01088-201ENST00000437737 SNX31Q8N9S9 440 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 OR1J4Q8NGS1 313 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 TRPC4APQ8TEL6 797 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 TMEM171Q8WVE6 324 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 PTCD3Q96EY7 689 aaKnown RBP12.78□□□□□ -0.36
LINC01088-201ENST00000437737 ZC3HAV1LQ96H79 300 aaKnown RBP12.78□□□□□ -0.36
LINC01088-201ENST00000437737 TMEM41AQ96HV5 264 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 HS3ST6Q96QI5 342 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 CCT8L2Q96SF2 557 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 ZNF382Q96SR6 550 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 PELOQ9BRX2 385 aaKnown RBP12.78□□□□□ -0.36
LINC01088-201ENST00000437737 TMEM79Q9BSE2 394 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 EHD1Q9H4M9 534 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 IPPKQ9H8X2 491 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 SLCO1B3Q9NPD5 702 aa12.78□□□□□ -0.36
LINC01088-201ENST00000437737 SAP18O00422 153 aaKnown RBP12.77□□□□□ -0.37
LINC01088-201ENST00000437737 MSTNO14793 375 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 UGDHO60701 494 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 CRCPO75575 148 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 ESRRBO95718 433 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 CPN1P15169 458 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 DRD4P21917 467 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 CASP3P42574 277 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 CCNG1P51959 295 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 NR1H2P55055 460 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 CDH13P55290 713 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 NRG3P56975 720 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 GABPB1Q06547 395 aaPredicted RBP12.77□□□□□ -0.37
LINC01088-201ENST00000437737 PCDH1Q08174 1060 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 SLAMF1Q13291 335 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 DOC2AQ14183 400 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 PAGE2BQ5JRK9 111 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 GKAP1Q5VSY0 366 aaPredicted RBP12.77□□□□□ -0.37
LINC01088-201ENST00000437737 TIGD3Q6B0B8 471 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 HEPHL1Q6MZM0 1159 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 ANGPTL8Q6UXH0 198 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 GOLGA7Q7Z5G4 137 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 GRAMD2AQ8IUY3 354 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 MEIOBQ8N635 442 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 BCAS4Q8TDM0 211 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 TANKQ92844 425 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 RIT1Q92963 219 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 TP53INP1Q96A56 240 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 CCT7Q99832 543 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 PIGQQ9BRB3 760 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 EFCAB11Q9BUY7 163 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 NTMT1Q9BV86 223 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 MS4A8Q9BY19 250 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 NOL11Q9H8H0 719 aaKnown RBP12.77□□□□□ -0.37
LINC01088-201ENST00000437737 METTL7AQ9H8H3 244 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 MID1IP1Q9NPA3 183 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 MS4A12Q9NXJ0 267 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 NBEAL1Q6ZS30 2694 aa12.77□□□□□ -0.37
LINC01088-201ENST00000437737 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.76□□□□□ -0.37
LINC01088-201ENST00000437737 A0A1W2PNV4 684 aa12.76□□□□□ -0.37
LINC01088-201ENST00000437737 NDUFAB1O14561 156 aa12.76□□□□□ -0.37
LINC01088-201ENST00000437737 PRAMEF4O60810 478 aa12.76□□□□□ -0.37
LINC01088-201ENST00000437737 PRKRAO75569 313 aaKnown RBP12.76□□□□□ -0.37
LINC01088-201ENST00000437737 TNFSF13O75888 250 aa12.76□□□□□ -0.37
LINC01088-201ENST00000437737 SCELO95171 688 aa12.76□□□□□ -0.37
LINC01088-201ENST00000437737 TP53P04637 393 aaPredicted RBP12.76□□□□□ -0.37
LINC01088-201ENST00000437737 ENO1P06733 434 aaKnown RBP12.76□□□□□ -0.37
LINC01088-201ENST00000437737 PCNAP12004 261 aa12.76□□□□□ -0.37
LINC01088-201ENST00000437737 CHMP24386 653 aa12.76□□□□□ -0.37
LINC01088-201ENST00000437737 TLX1P31314 330 aaPredicted RBP12.76□□□□□ -0.37
LINC01088-201ENST00000437737 CD79BP40259 229 aa12.76□□□□□ -0.37
LINC01088-201ENST00000437737 ARL1P40616 181 aaPredicted RBP12.76□□□□□ -0.37
LINC01088-201ENST00000437737 ATP5J2P56134 94 aa12.76□□□□□ -0.37
LINC01088-201ENST00000437737 TNFRSF17Q02223 184 aa12.76□□□□□ -0.37
LINC01088-201ENST00000437737 TNK1Q13470 666 aa12.76□□□□□ -0.37
LINC01088-201ENST00000437737 LAPTM5Q13571 262 aa12.76□□□□□ -0.37
LINC01088-201ENST00000437737 TMEM35AQ53FP2 167 aa12.76□□□□□ -0.37
LINC01088-201ENST00000437737 FBXO48Q5FWF7 155 aa12.76□□□□□ -0.37
LINC01088-201ENST00000437737 SH2D4BQ5SQS7 431 aa12.76□□□□□ -0.37
LINC01088-201ENST00000437737 PRAMEF9Q5VWM5 478 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms