RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 ARHGAP33O14559 1287 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 ATE1O95260 518 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 LGI1O95970 557 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 ALPPP05187 535 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 IGLV3-21P80748 117 aaPredicted RBP19.67■□□□□ 0.74
PTPRF-207ENST00000436724 MAP4K2Q12851 820 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 PIN1Q13526 163 aaPredicted RBP19.67■□□□□ 0.74
PTPRF-207ENST00000436724 MICAQ29983 383 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 RFX4Q33E94 735 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 ARHGAP11BQ3KRB8 267 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 EXOSC6Q5RKV6 272 aaKnown RBP19.67■□□□□ 0.74
PTPRF-207ENST00000436724 C1orf189Q5VU69 101 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 TYW3Q6IPR3 259 aaKnown RBP19.67■□□□□ 0.74
PTPRF-207ENST00000436724 ZC3H14Q6PJT7 736 aaKnown RBP19.67■□□□□ 0.74
PTPRF-207ENST00000436724 CDRT4Q8N9R6 151 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 FAM181AQ8N9Y4 354 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 GPR151Q8TDV0 419 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 SDF2Q99470 211 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 DOK1Q99704 481 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 PRR14Q9BWN1 585 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 CTPS2Q9NRF8 586 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 KCND3Q9UK17 655 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 SLC6A14Q9UN76 642 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 WDR45Q9Y484 360 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 TRBV4-1A0A0J9YWV2 114 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 SLITRK5O94991 958 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 CPNE6O95741 557 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 ALOX5P09917 674 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 SP9P0CG40 484 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 DCKP27707 260 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 GCGRP47871 477 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 GPR107Q5VW38 600 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 KMT5CQ86Y97 462 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 ADAMTS18Q8TE60 1221 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 NDC1Q9BTX1 674 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 LANCL2Q9NS86 450 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 CALML5Q9NZT1 146 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 SERTAD3Q9UJW9 196 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 FER1L5A0AVI2 2057 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 AGR2O95994 175 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 POU2F1P14859 743 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 TTKP33981 857 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 HOXD12P35452 270 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 PGDP52209 483 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 HMGA2P52926 109 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 HSD17B7P56937 341 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 NUP107P57740 925 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 ZNF155Q12901 538 aaPredicted RBP19.66■□□□□ 0.74
PTPRF-207ENST00000436724 DCTN2Q13561 401 aaKnown RBP19.66■□□□□ 0.74
PTPRF-207ENST00000436724 ZNF267Q14586 743 aaPredicted RBP19.66■□□□□ 0.74
PTPRF-207ENST00000436724 GPR68Q15743 365 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 TCEAL6Q6IPX3 200 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 C8orf59Q8N0T1 100 aaPredicted RBP19.66■□□□□ 0.74
PTPRF-207ENST00000436724 COX18Q8N8Q8 333 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 ZBTB44Q8NCP5 570 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 CEP76Q8TAP6 659 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 TCEAL3Q969E4 200 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 DGAT2Q96PD7 388 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 ALPK1Q96QP1 1244 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 NIPSNAP1Q9BPW8 284 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 PINK1Q9BXM7 581 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 DTX4Q9Y2E6 619 aa19.66■□□□□ 0.74
PTPRF-207ENST00000436724 GPR179Q6PRD1 2367 aa19.65■□□□□ 0.74
PTPRF-207ENST00000436724 GXYLT2A0PJZ3 443 aa19.65■□□□□ 0.74
PTPRF-207ENST00000436724 TMX2-CTNND1H3BSU7 103 aa19.65■□□□□ 0.74
PTPRF-207ENST00000436724 TPST2O60704 377 aa19.65■□□□□ 0.74
PTPRF-207ENST00000436724 GABRA3P34903 492 aa19.65■□□□□ 0.74
PTPRF-207ENST00000436724 CNR2P34972 360 aa19.65■□□□□ 0.74
PTPRF-207ENST00000436724 MAP3K8P41279 467 aa19.65■□□□□ 0.74
PTPRF-207ENST00000436724 STT3AP46977 705 aa19.65■□□□□ 0.74
PTPRF-207ENST00000436724 CLK3P49761 638 aaKnown RBP19.65■□□□□ 0.74
PTPRF-207ENST00000436724 TPD52P55327 224 aaPredicted RBP19.65■□□□□ 0.74
PTPRF-207ENST00000436724 FGD3Q5JSP0 725 aa19.65■□□□□ 0.74
PTPRF-207ENST00000436724 DCST2Q5T1A1 773 aa19.65■□□□□ 0.74
PTPRF-207ENST00000436724 SLC23A3Q6PIS1 610 aa19.65■□□□□ 0.74
PTPRF-207ENST00000436724 FIGNL1Q6PIW4 674 aa19.65■□□□□ 0.74
PTPRF-207ENST00000436724 CLIP4Q8N3C7 705 aa19.65■□□□□ 0.74
PTPRF-207ENST00000436724 OR52P1PQ8NH57 321 aa19.65■□□□□ 0.74
PTPRF-207ENST00000436724 ZNF420Q8TAQ5 688 aaPredicted RBP19.65■□□□□ 0.74
PTPRF-207ENST00000436724 CNPPD1Q9BV87 410 aa19.65■□□□□ 0.74
PTPRF-207ENST00000436724 NAA50Q9GZZ1 169 aaKnown RBP19.65■□□□□ 0.74
PTPRF-207ENST00000436724 DUSP22Q9NRW4 184 aa19.65■□□□□ 0.74
PTPRF-207ENST00000436724 A4GNTQ9UNA3 340 aa19.65■□□□□ 0.74
PTPRF-207ENST00000436724 SLC9A8Q9Y2E8 581 aa19.65■□□□□ 0.74
PTPRF-207ENST00000436724 NPIPA5A0A0B4J1W7 369 aa19.64■□□□□ 0.74
PTPRF-207ENST00000436724 NPIPA7E9PJI5 369 aa19.64■□□□□ 0.74
PTPRF-207ENST00000436724 H3BMQ9 156 aa19.64■□□□□ 0.74
PTPRF-207ENST00000436724 BCKDKO14874 412 aa19.64■□□□□ 0.74
PTPRF-207ENST00000436724 SLC16A6O15403 523 aa19.64■□□□□ 0.74
PTPRF-207ENST00000436724 YKT6O15498 198 aa19.64■□□□□ 0.74
PTPRF-207ENST00000436724 IFNA16P05015 189 aa19.64■□□□□ 0.74
PTPRF-207ENST00000436724 NPIPA8P0DM63 369 aa19.64■□□□□ 0.74
PTPRF-207ENST00000436724 EMDP50402 254 aa19.64■□□□□ 0.74
PTPRF-207ENST00000436724 RNF144AP50876 292 aaPredicted RBP19.64■□□□□ 0.74
PTPRF-207ENST00000436724 RAPSNQ13702 412 aa19.64■□□□□ 0.74
PTPRF-207ENST00000436724 NPTX1Q15818 432 aa19.64■□□□□ 0.74
PTPRF-207ENST00000436724 COLEC12Q5KU26 742 aa19.64■□□□□ 0.74
PTPRF-207ENST00000436724 MFSD4BQ5TF39 518 aa19.64■□□□□ 0.74
PTPRF-207ENST00000436724 ZNF773Q6PK81 442 aa19.64■□□□□ 0.74
PTPRF-207ENST00000436724 THAP5Q7Z6K1 395 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms