RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 SYT9Q86SS6 491 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 COMTD1Q86VU5 262 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 UXS1Q8NBZ7 420 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 LSM14AQ8ND56 463 aaKnown RBP10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 OR52H1Q8NGJ2 320 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 CHFRQ96EP1 664 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 PDXPQ96GD0 296 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 ZNF607Q96SK3 696 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 PARK7Q99497 189 aaKnown RBP10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 ZNF436Q9C0F3 470 aaPredicted RBP10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 CFAP97Q9P2B7 532 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 HCSTQ9UBK5 93 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 A4GNTQ9UNA3 340 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 MEIKINA0A087WXM9 373 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 ZC3H12DA2A288 527 aaKnown RBP10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 CHST10O43529 356 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 UGDHO60701 494 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 SLC2A10O95528 541 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 ZP3P21754 424 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 UQCRC2P22695 453 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 C21orf58P58505 322 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 DSG2Q14126 1118 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 RETSATQ6NUM9 610 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 OR6T1Q8NGN1 323 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 ZFPM2Q8WW38 1151 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 FAM46AQ96IP4 442 aaKnown RBP10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 ZNF578Q96N58 590 aaPredicted RBP10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 FERD3LQ96RJ6 166 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 QRSL1Q9H0R6 528 aaKnown RBP10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 FGF20Q9NP95 211 aaPredicted RBP10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 FBXL2Q9UKC9 423 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 SH2B3Q9UQQ2 575 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 COL4A4P53420 1690 aaPredicted RBP10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 A0A1B0GVI7 797 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 PGRMC2O15173 223 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 TFP02787 698 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 ANKRD34CP0C6C1 535 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 HSD3B2P26439 372 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 CDK5Q00535 292 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 CRHR2Q13324 411 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 MINDY4Q4G0A6 757 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 CHST9Q7L1S5 443 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 C11orf96Q7Z7L8 435 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 OAFQ86UD1 273 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 GANCQ8TET4 914 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 SMG9Q9H0W8 520 aaKnown RBP10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 RETREG1Q9H6L5 497 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 TAAR2Q9P1P5 351 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 PFDN2Q9UHV9 154 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 CHST2Q9Y4C5 530 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 LAMA3Q16787 3333 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 NLRC5Q86WI3 1866 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 SERTM1A2A2V5 107 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 SLC9B1P1A6NJY1 282 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 CATP04040 527 aaKnown RBP10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 MPC1LP0DKB6 136 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 ACP5P13686 325 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 IMPA1P29218 277 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 MMP12P39900 470 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 KCNJ5P48544 419 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 SMAD3P84022 425 aaKnown RBP10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 COL9A2Q14055 689 aaPredicted RBP10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 KCNA10Q16322 511 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 SLC25A35Q3KQZ1 300 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 SLC36A2Q495M3 483 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 LRFN4Q6PJG9 635 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 PRICKLE2Q7Z3G6 844 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 DEFB132Q7Z7B7 95 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 IL17RCQ8NAC3 791 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 ACOT12Q8WYK0 555 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 GCDHQ92947 438 aaPredicted RBP10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 TREX2Q9BQ50 279 aaPredicted RBP10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 ZDHHC6Q9H6R6 413 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 ADARB2Q9NS39 739 aaKnown RBP10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 TNFRSF10DQ9UBN6 386 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 ATPIF1Q9UII2 106 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 CHD5Q8TDI0 1954 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 IRGMA1A4Y4 181 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 SLC22A23A1A5C7 686 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 FAM170BA6NMN3 283 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 SOX30O94993 753 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 GNSP15586 552 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 PDHA2P29803 388 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 ACVR1BP36896 505 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 ZP1P60852 638 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 DEFA5Q01523 94 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 ZNF33BQ06732 778 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 ZNF155Q12901 538 aaPredicted RBP10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 NDUFAF5Q5TEU4 345 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 HBMQ6B0K9 141 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 TPRG1Q6ZUI0 275 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 CEACAM19Q7Z692 300 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 BBS10Q8TAM1 723 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 ADAMTS14Q8WXS8 1223 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 KAT2AQ92830 837 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 KLK6Q92876 244 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 TTTY10Q9BZA0 68 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 OR51I1Q9H343 314 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 NANSQ9NR45 359 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms