RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 HNRNPCL4P0DMR1 293 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 FCGR1AP12314 374 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 C19orf57Q0VDD7 668 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 TARDBPQ13148 414 aaKnown RBP eCLIP16.94■□□□□ 0.39e-9■■■□□ 17.5
HMGN1-206ENST00000431390 ARHGAP11BQ3KRB8 267 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 GPAT3Q53EU6 434 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 CYBRD1Q53TN4 286 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 FAM199XQ6PEV8 388 aaPredicted RBP16.94■□□□□ 0.3
HMGN1-206ENST00000431390 TMEM205Q6UW68 189 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 RNF111Q6ZNA4 994 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 LRRC74BQ6ZQY2 392 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 LANCL3Q6ZV70 420 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 WDR53Q7Z5U6 358 aaPredicted RBP16.94■□□□□ 0.3
HMGN1-206ENST00000431390 ANKRD37Q7Z713 158 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 GALNT10Q86SR1 603 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 FAM86B1Q8N7N1 296 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 C16orf52Q8NHV5 167 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 ZNF721Q8TF20 911 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 TAMM41Q96BW9 452 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 SLC47A1Q96FL8 570 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 YY1AP1Q9H869 796 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 C19orf25Q9UFG5 118 aaPredicted RBP16.94■□□□□ 0.3
HMGN1-206ENST00000431390 PADI1Q9ULC6 663 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 V9GYQ6 96 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 TEX51A0A1B0GUA7 166 aa16.93■□□□□ 0.3
HMGN1-206ENST00000431390 A8MUA0 341 aa16.93■□□□□ 0.3
HMGN1-206ENST00000431390 A8MVJ9 347 aa16.93■□□□□ 0.3
HMGN1-206ENST00000431390 PCDH17O14917 1159 aa16.93■□□□□ 0.3
HMGN1-206ENST00000431390 SUV39H1O43463 412 aa16.93■□□□□ 0.3
HMGN1-206ENST00000431390 BRINP1O60477 761 aa16.93■□□□□ 0.3
HMGN1-206ENST00000431390 C1QL1O75973 258 aa16.93■□□□□ 0.3
HMGN1-206ENST00000431390 CHRM4P08173 479 aa16.93■□□□□ 0.3
HMGN1-206ENST00000431390 ETS2P15036 469 aa16.93■□□□□ 0.3
HMGN1-206ENST00000431390 SLC37A1P57057 533 aa16.93■□□□□ 0.3
HMGN1-206ENST00000431390 SELENOWP63302 87 aa16.93■□□□□ 0.3
HMGN1-206ENST00000431390 RPS26P11Q5JNZ5 115 aaPredicted RBP16.93■□□□□ 0.3
HMGN1-206ENST00000431390 KRT73Q86Y46 540 aa16.93■□□□□ 0.3
HMGN1-206ENST00000431390 RASSF5Q8WWW0 418 aa16.93■□□□□ 0.3
HMGN1-206ENST00000431390 SLC39A7Q92504 469 aa16.93■□□□□ 0.3
HMGN1-206ENST00000431390 SLC46A1Q96NT5 459 aa16.93■□□□□ 0.3
HMGN1-206ENST00000431390 RUBCNLQ9H714 662 aa16.93■□□□□ 0.3
HMGN1-206ENST00000431390 GPC6Q9Y625 555 aaPredicted RBP16.93■□□□□ 0.3
HMGN1-206ENST00000431390 DSPPQ9NZW4 1301 aa16.92■□□□□ 0.3
HMGN1-206ENST00000431390 SERPINB7O75635 380 aa16.92■□□□□ 0.3
HMGN1-206ENST00000431390 H6PDO95479 791 aa16.92■□□□□ 0.3
HMGN1-206ENST00000431390 EIF2S3P41091 472 aaKnown RBP16.92■□□□□ 0.3
HMGN1-206ENST00000431390 FOXL2P58012 376 aa16.92■□□□□ 0.3
HMGN1-206ENST00000431390 HPCAP84074 193 aa16.92■□□□□ 0.3
HMGN1-206ENST00000431390 PSG6Q00889 435 aa16.92■□□□□ 0.3
HMGN1-206ENST00000431390 SFT2D3Q587I9 215 aa16.92■□□□□ 0.3
HMGN1-206ENST00000431390 FAAH2Q6GMR7 532 aa16.92■□□□□ 0.3
HMGN1-206ENST00000431390 COX18Q8N8Q8 333 aa16.92■□□□□ 0.3
HMGN1-206ENST00000431390 OR1N1Q8NGS0 311 aa16.92■□□□□ 0.3
HMGN1-206ENST00000431390 GPR151Q8TDV0 419 aa16.92■□□□□ 0.3
HMGN1-206ENST00000431390 LZICQ8WZA0 190 aa16.92■□□□□ 0.3
HMGN1-206ENST00000431390 DOHHQ9BU89 302 aa16.92■□□□□ 0.3
HMGN1-206ENST00000431390 SPATA5L1Q9BVQ7 753 aa16.92■□□□□ 0.3
HMGN1-206ENST00000431390 CHID1Q9BWS9 393 aa16.92■□□□□ 0.3
HMGN1-206ENST00000431390 OR8D2Q9GZM6 311 aa16.92■□□□□ 0.3
HMGN1-206ENST00000431390 SLC38A1Q9H2H9 487 aa16.92■□□□□ 0.3
HMGN1-206ENST00000431390 RIMS3Q9UJD0 308 aa16.92■□□□□ 0.3
HMGN1-206ENST00000431390 SAGE2PA6NJ88 616 aa16.91■□□□□ 0.3
HMGN1-206ENST00000431390 MFN2O95140 757 aa16.91■□□□□ 0.3
HMGN1-206ENST00000431390 SEMG1P04279 462 aa16.91■□□□□ 0.3
HMGN1-206ENST00000431390 GUSBP08236 651 aa16.91■□□□□ 0.3
HMGN1-206ENST00000431390 RAB40ALP0C0E4 278 aa16.91■□□□□ 0.3
HMGN1-206ENST00000431390 GABRA3P34903 492 aa16.91■□□□□ 0.3
HMGN1-206ENST00000431390 GCKP35557 465 aa16.91■□□□□ 0.3
HMGN1-206ENST00000431390 POU6F2P78424 691 aaPredicted RBP16.91■□□□□ 0.3
HMGN1-206ENST00000431390 DCST2Q5T1A1 773 aa16.91■□□□□ 0.3
HMGN1-206ENST00000431390 TIPARPQ7Z3E1 657 aaKnown RBP16.91■□□□□ 0.3
HMGN1-206ENST00000431390 CPEB2Q7Z5Q1 589 aaKnown RBP16.91■□□□□ 0.3
HMGN1-206ENST00000431390 LILRA2Q8N149 483 aa16.91■□□□□ 0.3
HMGN1-206ENST00000431390 ESX1Q8N693 406 aa16.91■□□□□ 0.3
HMGN1-206ENST00000431390 OR2Y1Q8NGV0 311 aa16.91■□□□□ 0.3
HMGN1-206ENST00000431390 FAM110BQ8TC76 370 aa16.91■□□□□ 0.3
HMGN1-206ENST00000431390 HSH2DQ96JZ2 352 aa16.91■□□□□ 0.3
HMGN1-206ENST00000431390 SDF2Q99470 211 aa16.91■□□□□ 0.3
HMGN1-206ENST00000431390 PKP2Q99959 881 aa16.91■□□□□ 0.3
HMGN1-206ENST00000431390 PRORYQ9H606 182 aa16.91■□□□□ 0.3
HMGN1-206ENST00000431390 POLE3Q9NRF9 147 aa16.91■□□□□ 0.3
HMGN1-206ENST00000431390 FOXJ2Q9P0K8 574 aa16.91■□□□□ 0.3
HMGN1-206ENST00000431390 COPS7AQ9UBW8 275 aa16.91■□□□□ 0.3
HMGN1-206ENST00000431390 PPIEQ9UNP9 301 aaKnown RBP16.91■□□□□ 0.3
HMGN1-206ENST00000431390 DTX4Q9Y2E6 619 aa16.91■□□□□ 0.3
HMGN1-206ENST00000431390 AK5Q9Y6K8 562 aa16.91■□□□□ 0.3
HMGN1-206ENST00000431390 SDK2Q58EX2 2172 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 OR6C76A6NM76 312 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 TMEM229AB2RXF0 380 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 ATXN7O15265 892 aaPredicted RBP16.9■□□□□ 0.3
HMGN1-206ENST00000431390 TIPRLO75663 272 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 KLF7O75840 302 aaPredicted RBP16.9■□□□□ 0.3
HMGN1-206ENST00000431390 TNFSF15O95150 251 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 OPN1SWP03999 348 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 FASP25445 335 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 TRHRP34981 398 aaPredicted RBP16.9■□□□□ 0.3
HMGN1-206ENST00000431390 MAGEA2P43356 314 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 SESN3P58005 492 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 AP1ARQ63HQ0 302 aa16.9■□□□□ 0.3
HMGN1-206ENST00000431390 LRRC69Q6ZNQ3 347 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms