RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 PLEKHA6Q9Y2H5 1048 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 DHRS7Q9Y394 339 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 CLCA3PQ9Y6N3 262 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 CDC42BPAQ5VT25 1732 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 DISP1Q96F81 1524 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 NAIPQ13075 1403 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 UBE4BO95155 1302 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 ZMYM6O95789 1325 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 GRIN2AQ12879 1464 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 MTUS2Q5JR59 1369 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 FAM230AA0A1W2PPH8 454 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 TTC26A0AVF1 554 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 ZSCAN5CA6NGD5 496 aaPredicted RBP1.9□□□□□ -2.11
PTPRC-208ENST00000427110 CCT8L1PA6NM43 557 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 SRPX2O60687 465 aaPredicted RBP1.9□□□□□ -2.11
PTPRC-208ENST00000427110 ZNF354AO60765 605 aaPredicted RBP1.9□□□□□ -2.11
PTPRC-208ENST00000427110 AKR7A3O95154 331 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 PTBP3O95758 552 aaKnown RBP1.9□□□□□ -2.11
PTPRC-208ENST00000427110 IGHG3P01860 377 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 ANXA4P09525 319 aaPredicted RBP1.9□□□□□ -2.11
PTPRC-208ENST00000427110 GSTT2P0CG29 244 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 GSTT2BP0CG30 244 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 RRASP10301 218 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 CCNA2P20248 432 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 PTPN6P29350 595 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 MAGEA9P43362 315 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 HTR5AP47898 357 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 PRELPP51888 382 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 ARHGDIBP52566 201 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 NAAAQ02083 359 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 SPP2Q13103 211 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 RUNX3Q13761 415 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 RAB35Q15286 201 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 CD226Q15762 336 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 ZIC1Q15915 447 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 MICAQ29983 383 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 ZNF699Q32M78 642 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 C15orf32Q32M92 178 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 ACSF3Q4G176 576 aaPredicted RBP1.9□□□□□ -2.11
PTPRC-208ENST00000427110 LCE3EQ5T5B0 92 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 VPS36Q86VN1 386 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 ZSCAN30Q86W11 494 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 HPS6Q86YV9 775 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 FGFRL1Q8N441 504 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 ARFGAP2Q8N6H7 521 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.9□□□□□ -2.11
PTPRC-208ENST00000427110 CCDC110Q8TBZ0 833 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 DQX1Q8TE96 717 aaKnown RBP1.9□□□□□ -2.11
PTPRC-208ENST00000427110 SELENOMQ8WWX9 145 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 NCLNQ969V3 563 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 PINX1Q96BK5 328 aaKnown RBP1.9□□□□□ -2.11
PTPRC-208ENST00000427110 NTNG2Q96CW9 530 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 CCDC51Q96ER9 411 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 C14orf79Q96F83 325 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 ELMO2Q96JJ3 720 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 FOXN4Q96NZ1 517 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 WRAP53Q9BUR4 548 aaKnown RBP1.9□□□□□ -2.11
PTPRC-208ENST00000427110 HSD3B7Q9H2F3 369 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 RPAP3Q9H6T3 665 aaPredicted RBP1.9□□□□□ -2.11
PTPRC-208ENST00000427110 KAT8Q9H7Z6 458 aaKnown RBP1.9□□□□□ -2.11
PTPRC-208ENST00000427110 C1orf123Q9NWV4 160 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 GPR83Q9NYM4 423 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 KLRF1Q9NZS2 232 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 ZNF581Q9P0T4 197 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 GHRLQ9UBU3 117 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 MLXQ9UH92 298 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 PURGQ9UJV8 347 aaKnown RBP1.9□□□□□ -2.11
PTPRC-208ENST00000427110 KDM5BQ9UGL1 1544 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 ZNF608Q9ULD9 1512 aaPredicted RBP1.9□□□□□ -2.11
PTPRC-208ENST00000427110 NUP160Q12769 1436 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 PTPRKQ15262 1439 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 ABCC4O15439 1325 aa1.9□□□□□ -2.11
PTPRC-208ENST00000427110 ABCA8O94911 1581 aa1.89□□□□□ -2.11
PTPRC-208ENST00000427110 CEP170Q5SW79 1584 aa1.89□□□□□ -2.11
PTPRC-208ENST00000427110 DENND4BO75064 1496 aaPredicted RBP1.89□□□□□ -2.11
PTPRC-208ENST00000427110 ADGRL2O95490 1459 aa1.89□□□□□ -2.11
PTPRC-208ENST00000427110 COL5A2P05997 1499 aaPredicted RBP1.89□□□□□ -2.11
PTPRC-208ENST00000427110 NUP153P49790 1475 aaKnown RBP1.89□□□□□ -2.11
PTPRC-208ENST00000427110 AGRNO00468 2067 aa1.89□□□□□ -2.11
PTPRC-208ENST00000427110 ROCK1Q13464 1354 aa1.89□□□□□ -2.11
PTPRC-208ENST00000427110 SHROOM2Q13796 1616 aa1.89□□□□□ -2.11
PTPRC-208ENST00000427110 A0A087WWV3 80 aa1.89□□□□□ -2.11
PTPRC-208ENST00000427110 ZNF840PA6NDX5 716 aa1.89□□□□□ -2.11
PTPRC-208ENST00000427110 ANKRD30BLA7E2S9 258 aa1.89□□□□□ -2.11
PTPRC-208ENST00000427110 NPIPA2E9PIF3 369 aa1.89□□□□□ -2.11
PTPRC-208ENST00000427110 H0YL77 283 aa1.89□□□□□ -2.11
PTPRC-208ENST00000427110 SAP18O00422 153 aaKnown RBP1.89□□□□□ -2.11
PTPRC-208ENST00000427110 E2F3O00716 465 aa1.89□□□□□ -2.11
PTPRC-208ENST00000427110 PDXKO00764 312 aa1.89□□□□□ -2.11
PTPRC-208ENST00000427110 CASKO14936 926 aa1.89□□□□□ -2.11
PTPRC-208ENST00000427110 ALOX15BO15296 676 aa1.89□□□□□ -2.11
PTPRC-208ENST00000427110 TYROBPO43914 113 aa1.89□□□□□ -2.11
PTPRC-208ENST00000427110 LCMT2O60294 686 aaKnown RBP1.89□□□□□ -2.11
PTPRC-208ENST00000427110 SCGB2A1O75556 95 aa1.89□□□□□ -2.11
PTPRC-208ENST00000427110 TOM1L1O75674 476 aa1.89□□□□□ -2.11
PTPRC-208ENST00000427110 B3GALNT1O75752 331 aa1.89□□□□□ -2.11
PTPRC-208ENST00000427110 IGHV3-9P01782 118 aa1.89□□□□□ -2.11
PTPRC-208ENST00000427110 CA3P07451 260 aa1.89□□□□□ -2.11
PTPRC-208ENST00000427110 WNT2P09544 360 aa1.89□□□□□ -2.11
PTPRC-208ENST00000427110 UMPSP11172 480 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms