RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 CCDC188H7C350 402 aa13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 REM1O75628 298 aa13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 KLK1P06870 262 aa13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 DEKP35659 375 aaKnown RBP13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 NEK2P51955 445 aa13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 RPS4XP62701 263 aaKnown RBP13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 ACAP2Q15057 778 aa13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 PFKFB4Q16877 469 aa13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 CLEC12BQ2HXU8 276 aa13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 GGTA1PQ4G0N0 100 aa13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 CCNYL2Q5T2Q4 361 aa13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 DNAJC14Q6Y2X3 702 aaPredicted RBP13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 DNM1P46Q6ZS02 220 aa13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 RAPH1Q70E73 1250 aa13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 GOLGA7Q7Z5G4 137 aa13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 SAMD14Q8IZD0 417 aaPredicted RBP13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 CENPLQ8N0S6 344 aaPredicted RBP13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 OR4K17Q8NGC6 315 aa13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 OR52R1Q8NGF1 315 aa13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 OR6K3Q8NGY3 331 aa13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 TRMT61AQ96FX7 289 aaKnown RBP13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 VSTM2LQ96N03 204 aa13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 SHCBP1LQ9BZQ2 653 aa13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 ABCG2Q9UNQ0 655 aa13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 CADP27708 2225 aa13.99□□□□□ -0.17
RPUSD3-204ENST00000424438 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 A0A087X1B8 175 aa13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 WIPF1O43516 503 aa13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 GFAPP14136 432 aa13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 IDUAP35475 653 aa13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 KRT20P35900 424 aa13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 RPS3AP61247 264 aaKnown RBP13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 SIRPAP78324 504 aa13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 TRMT12Q53H54 448 aaKnown RBP13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 STAC2Q6ZMT1 411 aa13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 COMMD6Q7Z4G1 85 aa13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 CMC1Q7Z7K0 106 aa13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 ADCY4Q8NFM4 1077 aa13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 FNDC9Q8TBE3 224 aa13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 GFM2Q969S9 779 aaKnown RBP13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 NXNL1Q96CM4 212 aa13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 ZC3HAV1LQ96H79 300 aaKnown RBP13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 ADOQ96SZ5 270 aa13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 FAIM2Q9BWQ8 316 aa13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 PINK1Q9BXM7 581 aa13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 MRPL1Q9BYD6 325 aaKnown RBP13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 REG4Q9BYZ8 158 aa13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 STMN4Q9H169 189 aaPredicted RBP13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 ZBTB26Q9HCK0 441 aa13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 PAQR5Q9NXK6 330 aaPredicted RBP13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 EHD3Q9NZN3 535 aa13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 GPR52Q9Y2T5 361 aa13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 AP4B1Q9Y6B7 739 aa13.98□□□□□ -0.17
RPUSD3-204ENST00000424438 NID1P14543 1247 aa13.97□□□□□ -0.17
RPUSD3-204ENST00000424438 PSMB1P20618 241 aaKnown RBP13.97□□□□□ -0.17
RPUSD3-204ENST00000424438 IL12BP29460 328 aa13.97□□□□□ -0.17
RPUSD3-204ENST00000424438 FEN1P39748 380 aaKnown RBP13.97□□□□□ -0.17
RPUSD3-204ENST00000424438 SLMAPQ14BN4 828 aa13.97□□□□□ -0.17
RPUSD3-204ENST00000424438 PON3Q15166 354 aa13.97□□□□□ -0.17
RPUSD3-204ENST00000424438 CHRFAM7AQ494W8 412 aa13.97□□□□□ -0.17
RPUSD3-204ENST00000424438 ZNF628Q5EBL2 1059 aa13.97□□□□□ -0.17
RPUSD3-204ENST00000424438 C3orf62Q6ZUJ4 267 aa13.97□□□□□ -0.17
RPUSD3-204ENST00000424438 LARP4Q71RC2 724 aaKnown RBP eCLIP13.97□□□□□ -0.173e-6■□□□□ 9.6
RPUSD3-204ENST00000424438 EXOC3L1Q86VI1 746 aa13.97□□□□□ -0.17
RPUSD3-204ENST00000424438 OR2M3Q8NG83 312 aa13.97□□□□□ -0.17
RPUSD3-204ENST00000424438 TM4SF18Q96CE8 201 aa13.97□□□□□ -0.17
RPUSD3-204ENST00000424438 KLHL29Q96CT2 875 aa13.97□□□□□ -0.17
RPUSD3-204ENST00000424438 CNRIP1Q96F85 164 aaPredicted RBP13.97□□□□□ -0.17
RPUSD3-204ENST00000424438 GMPPAQ96IJ6 420 aaPredicted RBP13.97□□□□□ -0.17
RPUSD3-204ENST00000424438 GRIP2Q9C0E4 1043 aa13.97□□□□□ -0.17
RPUSD3-204ENST00000424438 KLHL4Q9C0H6 718 aa13.97□□□□□ -0.17
RPUSD3-204ENST00000424438 BRF2Q9HAW0 419 aa13.97□□□□□ -0.17
RPUSD3-204ENST00000424438 LRTM1Q9HBL6 345 aa13.97□□□□□ -0.17
RPUSD3-204ENST00000424438 SDHAF3Q9NRP4 125 aa13.97□□□□□ -0.17
RPUSD3-204ENST00000424438 GLRX2Q9NS18 164 aa13.97□□□□□ -0.17
RPUSD3-204ENST00000424438 TMCO1Q9UM00 188 aa13.97□□□□□ -0.17
RPUSD3-204ENST00000424438 EMC9Q9Y3B6 208 aa13.97□□□□□ -0.17
RPUSD3-204ENST00000424438 ZNF780BQ9Y6R6 833 aa13.97□□□□□ -0.17
RPUSD3-204ENST00000424438 PLCE1Q9P212 2302 aa13.96□□□□□ -0.17
RPUSD3-204ENST00000424438 OR2M5A3KFT3 312 aa13.96□□□□□ -0.17
RPUSD3-204ENST00000424438 RNF223E7ERA6 249 aa13.96□□□□□ -0.17
RPUSD3-204ENST00000424438 OR7A17O14581 309 aa13.96□□□□□ -0.17
RPUSD3-204ENST00000424438 PLOD3O60568 738 aa13.96□□□□□ -0.17
RPUSD3-204ENST00000424438 SS18L1O75177 396 aaPredicted RBP13.96□□□□□ -0.17
RPUSD3-204ENST00000424438 ERAL1O75616 437 aaKnown RBP13.96□□□□□ -0.17
RPUSD3-204ENST00000424438 PCSK2P16519 638 aa13.96□□□□□ -0.17
RPUSD3-204ENST00000424438 EVI2BP34910 448 aa13.96□□□□□ -0.17
RPUSD3-204ENST00000424438 THBS2P35442 1172 aa13.96□□□□□ -0.17
RPUSD3-204ENST00000424438 SUCLG1P53597 346 aaKnown RBP13.96□□□□□ -0.17
RPUSD3-204ENST00000424438 DUSP2Q05923 314 aa13.96□□□□□ -0.17
RPUSD3-204ENST00000424438 GALNT1Q10472 559 aaPredicted RBP13.96□□□□□ -0.17
RPUSD3-204ENST00000424438 IFT88Q13099 833 aa13.96□□□□□ -0.17
RPUSD3-204ENST00000424438 TRAF3Q13114 568 aa13.96□□□□□ -0.17
RPUSD3-204ENST00000424438 VEZF1Q14119 521 aa13.96□□□□□ -0.17
RPUSD3-204ENST00000424438 ERCC6LQ2NKX8 1250 aa13.96□□□□□ -0.17
RPUSD3-204ENST00000424438 TMEM44Q2T9K0 475 aa13.96□□□□□ -0.17
RPUSD3-204ENST00000424438 BEND4Q6ZU67 534 aa13.96□□□□□ -0.17
RPUSD3-204ENST00000424438 CREG2Q8IUH2 290 aa13.96□□□□□ -0.17
RPUSD3-204ENST00000424438 KLHL7Q8IXQ5 586 aa13.96□□□□□ -0.17
RPUSD3-204ENST00000424438 UBQLNLQ8IYU4 475 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms