RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 MFRPQ9BY79 579 aa14.29□□□□□ -0.12
C9orf3-204ENST00000424143 MCUBQ9NWR8 336 aa14.29□□□□□ -0.12
C9orf3-204ENST00000424143 EMC3Q9P0I2 261 aa14.29□□□□□ -0.12
C9orf3-204ENST00000424143 SCN5AQ14524 2016 aa14.29□□□□□ -0.12
C9orf3-204ENST00000424143 GSAPA4D1B5 854 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 GTPBP1O00178 669 aaKnown RBP14.28□□□□□ -0.12
C9orf3-204ENST00000424143 MAN2B1O00754 1011 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 SPINT1O43278 529 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 TGM5O43548 720 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 OR5F1O95221 314 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 LALBAP00709 142 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 NPR2P20594 1047 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 F8A1P23610 371 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 SSTR4P31391 388 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 GPR1P46091 355 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 TAS2R41P59536 307 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 FUT5Q11128 374 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 GPR176Q14439 515 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 GPR162Q16538 588 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 PGGHGQ32M88 737 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 SPOUT1Q5T280 376 aaKnown RBP14.28□□□□□ -0.12
C9orf3-204ENST00000424143 ZBTB37Q5TC79 503 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 VASNQ6EMK4 673 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 CNKSR3Q6P9H4 555 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 IDO2Q6ZQW0 420 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 OR4M1Q8NGD0 313 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 OR5K2Q8NHB8 316 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 HGDQ93099 445 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 BEX2Q9BXY8 128 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 ABCG4Q9H172 646 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 EGLN3Q9H6Z9 239 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 HMX1Q9NP08 348 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-204ENST00000424143 ZCCHC3Q9NUD5 404 aaKnown RBP14.28□□□□□ -0.12
C9orf3-204ENST00000424143 NLGN3Q9NZ94 848 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 ENTPD4Q9Y227 616 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 ASF1AQ9Y294 204 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 NCKAP1Q9Y2A7 1128 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 CLCA3PQ9Y6N3 262 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 PLXND1Q9Y4D7 1925 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 MYOFQ9NZM1 2061 aa14.28□□□□□ -0.12
C9orf3-204ENST00000424143 AHCYP23526 432 aa14.27□□□□□ -0.12
C9orf3-204ENST00000424143 TALDO1P37837 337 aa14.27□□□□□ -0.12
C9orf3-204ENST00000424143 AVPR1BP47901 424 aa14.27□□□□□ -0.12
C9orf3-204ENST00000424143 CEBPEQ15744 281 aa14.27□□□□□ -0.12
C9orf3-204ENST00000424143 ZIC1Q15915 447 aa14.27□□□□□ -0.12
C9orf3-204ENST00000424143 ARHGAP15Q53QZ3 475 aa14.27□□□□□ -0.12
C9orf3-204ENST00000424143 CEP78Q5JTW2 689 aa14.27□□□□□ -0.12
C9orf3-204ENST00000424143 FAM46CQ5VWP2 391 aa14.27□□□□□ -0.12
C9orf3-204ENST00000424143 MRM1Q6IN84 353 aaKnown RBP14.27□□□□□ -0.12
C9orf3-204ENST00000424143 PYHIN1Q6K0P9 492 aa14.27□□□□□ -0.12
C9orf3-204ENST00000424143 ADAMTSL4Q6UY14 1074 aa14.27□□□□□ -0.12
C9orf3-204ENST00000424143 MBOAT2Q6ZWT7 520 aa14.27□□□□□ -0.12
C9orf3-204ENST00000424143 ELMOD2Q8IZ81 293 aa14.27□□□□□ -0.12
C9orf3-204ENST00000424143 OR5H6Q8NGV6 325 aa14.27□□□□□ -0.12
C9orf3-204ENST00000424143 BRIX1Q8TDN6 353 aaKnown RBP14.27□□□□□ -0.12
C9orf3-204ENST00000424143 TFGQ92734 400 aaPredicted RBP14.27□□□□□ -0.12
C9orf3-204ENST00000424143 RFT1Q96AA3 541 aa14.27□□□□□ -0.12
C9orf3-204ENST00000424143 OTUB1Q96FW1 271 aaPredicted RBP14.27□□□□□ -0.12
C9orf3-204ENST00000424143 COX14Q96I36 57 aa14.27□□□□□ -0.12
C9orf3-204ENST00000424143 DPH7Q9BTV6 452 aa14.27□□□□□ -0.12
C9orf3-204ENST00000424143 MENTQ9BUN1 341 aa14.27□□□□□ -0.12
C9orf3-204ENST00000424143 GHITMQ9H3K2 345 aa14.27□□□□□ -0.12
C9orf3-204ENST00000424143 KRCC1Q9NPI7 259 aaPredicted RBP14.27□□□□□ -0.12
C9orf3-204ENST00000424143 BABAM2Q9NXR7 383 aa14.27□□□□□ -0.12
C9orf3-204ENST00000424143 TRPC4Q9UBN4 977 aa14.27□□□□□ -0.12
C9orf3-204ENST00000424143 NUBP2Q9Y5Y2 271 aa14.27□□□□□ -0.12
C9orf3-204ENST00000424143 COL4A3Q01955 1670 aa14.27□□□□□ -0.13
C9orf3-204ENST00000424143 A0A1B0GTQ1 180 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 A0A1B0GVI7 797 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 SHISA3A0PJX4 238 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 ISM1B1AKI9 464 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 RTCAO00442 366 aaKnown RBP14.26□□□□□ -0.13
C9orf3-204ENST00000424143 SLC9A3R1O14745 358 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-204ENST00000424143 EMC8O43402 210 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 RNF13O43567 381 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 CHP2O43745 196 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 GNRH1P01148 92 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 ELK1P19419 428 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 CELP19835 753 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 TSFMP43897 325 aaKnown RBP14.26□□□□□ -0.13
C9orf3-204ENST00000424143 TAS2R43P59537 309 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 FZD5Q13467 585 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 GRIN2CQ14957 1233 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 ZNF77Q15935 545 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 COL28A1Q2UY09 1125 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 ZNF311Q5JNZ3 666 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 ZNF697Q5TEC3 545 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 KIAA1161Q6NSJ0 714 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 CDC73Q6P1J9 531 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 SMARCD3Q6STE5 483 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 BAIAP2L2Q6UXY1 529 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 ZNF620Q6ZNG0 422 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 RRM2BQ7LG56 351 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 ADCK2Q7Z695 626 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 LHFPL3Q86UP9 236 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 CMIPQ8IY22 773 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 LRRC17Q8N6Y2 441 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 OR4Q3Q8NH05 313 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 SPRYD4Q8WW59 207 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-204ENST00000424143 HHIPL1Q96JK4 782 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms