RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 NPSR1Q6W5P4 371 aa8.33□□□□□ -1.08
HPS4-204ENST00000422379 HMGN2P46Q86SG4 172 aa8.33□□□□□ -1.08
HPS4-204ENST00000422379 STK32CQ86UX6 486 aa8.33□□□□□ -1.08
HPS4-204ENST00000422379 LSRQ86X29 649 aaPredicted RBP8.33□□□□□ -1.08
HPS4-204ENST00000422379 CACTIN-AS1Q8N1I8 211 aa8.33□□□□□ -1.08
HPS4-204ENST00000422379 NFAM1Q8NET5 270 aaPredicted RBP8.33□□□□□ -1.08
HPS4-204ENST00000422379 NFKBIDQ8NI38 313 aa8.33□□□□□ -1.08
HPS4-204ENST00000422379 MIPOL1Q8TD10 442 aa8.33□□□□□ -1.08
HPS4-204ENST00000422379 ZNF721Q8TF20 911 aa8.33□□□□□ -1.08
HPS4-204ENST00000422379 SLC38A5Q8WUX1 472 aa8.33□□□□□ -1.08
HPS4-204ENST00000422379 CYGBQ8WWM9 190 aa8.33□□□□□ -1.08
HPS4-204ENST00000422379 HOXB13Q92826 284 aaPredicted RBP8.33□□□□□ -1.08
HPS4-204ENST00000422379 SLC35A4Q96G79 324 aa8.33□□□□□ -1.08
HPS4-204ENST00000422379 RBM18Q96H35 190 aaKnown RBP8.33□□□□□ -1.08
HPS4-204ENST00000422379 SENP5Q96HI0 755 aaPredicted RBP8.33□□□□□ -1.08
HPS4-204ENST00000422379 FBXL20Q96IG2 436 aa8.33□□□□□ -1.08
HPS4-204ENST00000422379 SLC35G5Q96KT7 338 aa8.33□□□□□ -1.08
HPS4-204ENST00000422379 VSTM2LQ96N03 204 aa8.33□□□□□ -1.08
HPS4-204ENST00000422379 OR7D2Q96RA2 312 aa8.33□□□□□ -1.08
HPS4-204ENST00000422379 ZPBPQ9BS86 351 aa8.33□□□□□ -1.08
HPS4-204ENST00000422379 CRB3Q9BUF7 120 aa8.33□□□□□ -1.08
HPS4-204ENST00000422379 CNPPD1Q9BV87 410 aa8.33□□□□□ -1.08
HPS4-204ENST00000422379 NUDT9Q9BW91 350 aa8.33□□□□□ -1.08
HPS4-204ENST00000422379 POLR1BQ9H9Y6 1135 aa8.33□□□□□ -1.08
HPS4-204ENST00000422379 PNPLA3Q9NST1 481 aa8.33□□□□□ -1.08
HPS4-204ENST00000422379 FBXO34Q9NWN3 711 aa8.33□□□□□ -1.08
HPS4-204ENST00000422379 PTGFRNQ9P2B2 879 aa8.33□□□□□ -1.08
HPS4-204ENST00000422379 PCDHGA8Q9Y5G5 932 aa8.33□□□□□ -1.08
HPS4-204ENST00000422379 CACNA1AO00555 2505 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 CHD8Q9HCK8 2581 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 IGF2RP11717 2491 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 ATMQ13315 3056 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 CDRT15L2A8MXV6 281 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 G3V2T6 193 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 GNGT2O14610 69 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 ALOX12BO75342 701 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 PGM3O95394 542 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 KRT75O95678 551 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 CLIC3O95833 236 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 SEMG1P04279 462 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 ALPLP05186 524 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 KLK3P07288 261 aaPredicted RBP8.32□□□□□ -1.08
HPS4-204ENST00000422379 HEXBP07686 556 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 HOXB6P17509 224 aaKnown RBP8.32□□□□□ -1.08
HPS4-204ENST00000422379 SPINK2P20155 84 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 AGXTP21549 392 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 MATN1P21941 496 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 PCGF2P35227 344 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 CAPGP40121 348 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 ALDH3A2P51648 485 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 EMP2P54851 167 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 SLC37A1P57057 533 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 PPP1R8Q12972 351 aaKnown RBP8.32□□□□□ -1.08
HPS4-204ENST00000422379 SRSF6Q13247 344 aaKnown RBP8.32□□□□□ -1.08
HPS4-204ENST00000422379 APOFQ13790 326 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 SERTAD2Q14140 314 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 TGIF1Q15583 401 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 ELAVL1Q15717 326 aaKnown RBP8.32□□□□□ -1.08
HPS4-204ENST00000422379 TMEM205Q6UW68 189 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 CBLL1Q75N03 491 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 VTCN1Q7Z7D3 282 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 TMEM179BQ7Z7N9 219 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 COMTD1Q86VU5 262 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 ZDHHC13Q8IUH4 622 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 ZDHHC21Q8IVQ6 265 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 HS3ST5Q8IZT8 346 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 DHRSXQ8N5I4 330 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 OR4N2Q8NGD1 307 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 OR56A1Q8NGH5 318 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 C16orf52Q8NHV5 167 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 SLC2A12Q8TD20 617 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 MS4A4EQ96PG1 132 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 LMF1Q96S06 567 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 WDR54Q9H977 334 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 C14orf105Q9NVL8 296 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 VNN3Q9NY84 501 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 RPS6KA6Q9UK32 745 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 PADI1Q9ULC6 663 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 FAF1Q9UNN5 650 aaPredicted RBP8.32□□□□□ -1.08
HPS4-204ENST00000422379 ABCG2Q9UNQ0 655 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 PTRH2Q9Y3E5 179 aaKnown RBP8.32□□□□□ -1.08
HPS4-204ENST00000422379 HS3ST3B1Q9Y662 390 aa8.32□□□□□ -1.08
HPS4-204ENST00000422379 MRPS18BQ9Y676 258 aaKnown RBP8.32□□□□□ -1.08
HPS4-204ENST00000422379 CENPVL1A0A0U1RR11 272 aa8.31□□□□□ -1.08
HPS4-204ENST00000422379 LOC101059948A0A1B0GTJ6 334 aa8.31□□□□□ -1.08
HPS4-204ENST00000422379 GXYLT2A0PJZ3 443 aa8.31□□□□□ -1.08
HPS4-204ENST00000422379 SEC24DO94855 1032 aaPredicted RBP8.31□□□□□ -1.08
HPS4-204ENST00000422379 CLPTM1O96005 669 aa8.31□□□□□ -1.08
HPS4-204ENST00000422379 HPRP00739 348 aa8.31□□□□□ -1.08
HPS4-204ENST00000422379 TFAP2AP05549 437 aa8.31□□□□□ -1.08
HPS4-204ENST00000422379 CHRM4P08173 479 aa8.31□□□□□ -1.08
HPS4-204ENST00000422379 CELA2AP08217 269 aa8.31□□□□□ -1.08
HPS4-204ENST00000422379 ARAFP10398 606 aa8.31□□□□□ -1.08
HPS4-204ENST00000422379 ATP6V1B1P15313 513 aa8.31□□□□□ -1.08
HPS4-204ENST00000422379 DCTP40126 519 aa8.31□□□□□ -1.08
HPS4-204ENST00000422379 STAT5AP42229 794 aa8.31□□□□□ -1.08
HPS4-204ENST00000422379 PCBP3P57721 371 aaKnown RBP8.31□□□□□ -1.08
HPS4-204ENST00000422379 DSTNP60981 165 aa8.31□□□□□ -1.08
HPS4-204ENST00000422379 PRR5P85299 388 aa8.31□□□□□ -1.08
HPS4-204ENST00000422379 PPP2R2BQ00005 443 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms