RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 MRPS22P82650 360 aaKnown RBP14.47□□□□□ -0.09
BRAT1-202ENST00000421712 EFR3AQ14156 821 aa14.47□□□□□ -0.09
BRAT1-202ENST00000421712 TBCELQ5QJ74 424 aa14.47□□□□□ -0.09
BRAT1-202ENST00000421712 BICRALQ6AI39 1079 aa14.47□□□□□ -0.09
BRAT1-202ENST00000421712 ZNF621Q6ZSS3 439 aa14.47□□□□□ -0.09
BRAT1-202ENST00000421712 C6orf120Q7Z4R8 191 aa14.47□□□□□ -0.09
BRAT1-202ENST00000421712 SLC16A11Q8NCK7 471 aa14.47□□□□□ -0.09
BRAT1-202ENST00000421712 GALNT11Q8NCW6 608 aa14.47□□□□□ -0.09
BRAT1-202ENST00000421712 OR9I1Q8NGQ6 314 aa14.47□□□□□ -0.09
BRAT1-202ENST00000421712 ADAMTS15Q8TE58 950 aa14.47□□□□□ -0.09
BRAT1-202ENST00000421712 GIMAP5Q96F15 307 aa14.47□□□□□ -0.09
BRAT1-202ENST00000421712 RMND5BQ96G75 393 aaPredicted RBP14.47□□□□□ -0.09
BRAT1-202ENST00000421712 NODALQ96S42 347 aa14.47□□□□□ -0.09
BRAT1-202ENST00000421712 SECISBP2Q96T21 854 aaKnown RBP14.47□□□□□ -0.09
BRAT1-202ENST00000421712 TMEM120AQ9BXJ8 343 aa14.47□□□□□ -0.09
BRAT1-202ENST00000421712 ACTRT3Q9BYD9 372 aa14.47□□□□□ -0.09
BRAT1-202ENST00000421712 CCDC134Q9H6E4 229 aa14.47□□□□□ -0.09
BRAT1-202ENST00000421712 RMND5AQ9H871 391 aa14.47□□□□□ -0.09
BRAT1-202ENST00000421712 TUBA8Q9NY65 449 aaPredicted RBP14.47□□□□□ -0.09
BRAT1-202ENST00000421712 KLRF1Q9NZS2 232 aa14.47□□□□□ -0.09
BRAT1-202ENST00000421712 CCDC167Q9P0B6 97 aa14.47□□□□□ -0.09
BRAT1-202ENST00000421712 SEC14L3Q9UDX4 400 aa14.47□□□□□ -0.09
BRAT1-202ENST00000421712 BTNL2Q9UIR0 455 aa14.47□□□□□ -0.09
BRAT1-202ENST00000421712 CNOT11Q9UKZ1 510 aaKnown RBP14.47□□□□□ -0.09
BRAT1-202ENST00000421712 BOKQ9UMX3 212 aaPredicted RBP14.47□□□□□ -0.09
BRAT1-202ENST00000421712 ANKUB1A6NFN9 424 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 CCDC154A6NI56 674 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 TSPAN2O60636 221 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 SCN2BO60939 215 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 ANP32DO95626 131 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 ACP2P11117 423 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 EDN3P14138 238 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 MATN1P21941 496 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 ARFIP2P53365 341 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 PNLIPRP2P54317 469 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 KCNK10P57789 538 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 LRRC74AQ0VAA2 488 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 MRPL49Q13405 166 aaKnown RBP14.46□□□□□ -0.09
BRAT1-202ENST00000421712 SQLEQ14534 574 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 DUSP5Q16690 384 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 AGKQ53H12 422 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 CDC73Q6P1J9 531 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 ANGPTL8Q6UXH0 198 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 GFRALQ6UXV0 394 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 GALNT10Q86SR1 603 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 PACS2Q86VP3 889 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 SLC22A16Q86VW1 577 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 TRIML2Q8N7C3 387 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 COX18Q8N8Q8 333 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 ZFP62Q8NB50 900 aaPredicted RBP14.46□□□□□ -0.09
BRAT1-202ENST00000421712 HGDQ93099 445 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 SLC35G5Q96KT7 338 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 CCDC115Q96NT0 180 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 BARD1Q99728 777 aaKnown RBP14.46□□□□□ -0.09
BRAT1-202ENST00000421712 INPP5KQ9BT40 448 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 RABEP2Q9H5N1 569 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 IL1RL2Q9HB29 575 aa14.46□□□□□ -0.09
BRAT1-202ENST00000421712 ZNF462Q96JM2 2506 aa14.46□□□□□ -0.1
BRAT1-202ENST00000421712 SHANK1Q9Y566 2161 aa14.46□□□□□ -0.1
BRAT1-202ENST00000421712 C2orf72A6NCS6 295 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 PRAMEF25A6NGN4 478 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 NR5A2O00482 541 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 RFXANKO14593 260 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 CDC40O60508 579 aaKnown RBP eCLIP14.45□□□□□ -0.1
BRAT1-202ENST00000421712 NKX2-2O95096 273 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 UNC5CO95185 931 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 SNX4O95219 450 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 WISP1O95388 367 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 CBX6O95503 412 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 GSNP06396 782 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 CYP4B1P13584 511 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 CASP3P42574 277 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 CLK3P49761 638 aaKnown RBP14.45□□□□□ -0.1
BRAT1-202ENST00000421712 CASP9P55211 416 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 POU6F2P78424 691 aaPredicted RBP14.45□□□□□ -0.1
BRAT1-202ENST00000421712 TIGD2Q4W5G0 525 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 KRTCAP3Q53RY4 240 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 RNFT1Q5M7Z0 435 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 C6orf10Q5SRN2 563 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 ZNF324BQ6AW86 544 aaPredicted RBP14.45□□□□□ -0.1
BRAT1-202ENST00000421712 FIGNL1Q6PIW4 674 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 ST6GALNAC3Q8NDV1 305 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 STON2Q8WXE9 905 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 CDS1Q92903 461 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 VPS33AQ96AX1 596 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 SLC35A4Q96G79 324 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 ITCHQ96J02 903 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 ZNF597Q96LX8 424 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 SLX1AQ9BQ83 275 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 SLC35A5Q9BS91 424 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 OSBPL11Q9BXB4 747 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 ANGPTL4Q9BY76 406 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 TTTY12Q9BZ98 90 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 DEFB127Q9H1M4 99 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 ZFP64Q9NPA5 681 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 GPATCH2Q9NW75 528 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 PCDHGB3Q9Y5G1 929 aa14.45□□□□□ -0.1
BRAT1-202ENST00000421712 NBASA2RRP1 2371 aa14.44□□□□□ -0.1
BRAT1-202ENST00000421712 ANKRD33BA6NCL7 494 aa14.44□□□□□ -0.1
BRAT1-202ENST00000421712 GNB5O14775 395 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms