RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 ZNF702PQ9H963 129 aa3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 FAM114A2Q9NRY5 505 aa3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 COMMD8Q9NX08 183 aa3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 APOBEC3BQ9UH17 382 aaKnown RBP3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 APPL1Q9UKG1 709 aa3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 TMCC3Q9ULS5 477 aa3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 ABCC9O60706 1549 aa3□□□□□ -1.93
HMGB1P49-201ENST00000418882 FAM231BA6NCW3 169 aa3□□□□□ -1.93
HMGB1P49-201ENST00000418882 H0Y9J4 135 aa3□□□□□ -1.93
HMGB1P49-201ENST00000418882 IMPA2O14732 288 aa3□□□□□ -1.93
HMGB1P49-201ENST00000418882 CFLARO15519 480 aa3□□□□□ -1.93
HMGB1P49-201ENST00000418882 GNSP15586 552 aa3□□□□□ -1.93
HMGB1P49-201ENST00000418882 TMOD1P28289 359 aa3□□□□□ -1.93
HMGB1P49-201ENST00000418882 ATP6V1E1P36543 226 aa3□□□□□ -1.93
HMGB1P49-201ENST00000418882 HSD17B7P56937 341 aa3□□□□□ -1.93
HMGB1P49-201ENST00000418882 RIPPLY3P57055 190 aa3□□□□□ -1.93
HMGB1P49-201ENST00000418882 PRKCEQ02156 737 aa3□□□□□ -1.93
HMGB1P49-201ENST00000418882 UBXN1Q04323 297 aa3□□□□□ -1.93
HMGB1P49-201ENST00000418882 CKAP4Q07065 602 aaKnown RBP3□□□□□ -1.93
HMGB1P49-201ENST00000418882 ZSWIM7Q19AV6 140 aa3□□□□□ -1.93
HMGB1P49-201ENST00000418882 HERC4Q5GLZ8 1057 aaPredicted RBP3□□□□□ -1.93
HMGB1P49-201ENST00000418882 LGSNQ5TDP6 509 aa3□□□□□ -1.93
HMGB1P49-201ENST00000418882 C9orf40Q8IXQ3 194 aa3□□□□□ -1.93
HMGB1P49-201ENST00000418882 CCDC36Q8IYA8 594 aa3□□□□□ -1.93
HMGB1P49-201ENST00000418882 ZNF619Q8N2I2 560 aa3□□□□□ -1.93
HMGB1P49-201ENST00000418882 LRRC17Q8N6Y2 441 aa3□□□□□ -1.93
HMGB1P49-201ENST00000418882 TFB1MQ8WVM0 346 aaKnown RBP3□□□□□ -1.93
HMGB1P49-201ENST00000418882 COQ7Q99807 217 aa3□□□□□ -1.93
HMGB1P49-201ENST00000418882 C19orf24Q9BVV8 132 aa3□□□□□ -1.93
HMGB1P49-201ENST00000418882 FAM124BQ9H5Z6 455 aaPredicted RBP3□□□□□ -1.93
HMGB1P49-201ENST00000418882 TDRKHQ9Y2W6 561 aaKnown RBP3□□□□□ -1.93
HMGB1P49-201ENST00000418882 KNSTRNQ9Y448 316 aa3□□□□□ -1.93
HMGB1P49-201ENST00000418882 BUB1O43683 1085 aa2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 PROS1P07225 676 aa2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 CPN1P15169 458 aa2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 METAP1P53582 386 aa2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 BNIP1Q12981 228 aa2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 BTG3Q14201 252 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 EIF2B1Q14232 305 aaKnown RBP2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 CAPRIN1Q14444 709 aaKnown RBP2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 LRIT3Q3SXY7 679 aa2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 ACSF3Q4G176 576 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 PARP10Q53GL7 1025 aa2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 UNC5DQ6UXZ4 953 aa2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 CATSPER4Q7RTX7 472 aa2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 TGIF2LYQ8IUE0 185 aa2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 UNC45BQ8IWX7 931 aa2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 PSMA8Q8TAA3 256 aa2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 PHYHIPQ92561 330 aa2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 SLC25A38Q96DW6 304 aa2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 FAM122AQ96E09 287 aa2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 PLEKHF1Q96S99 279 aa2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 MYCBPQ99417 103 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 NDUFAF3Q9BU61 184 aa2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 TSSK1BQ9BXA7 367 aa2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 TEX13AQ9BXU3 409 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 DCAF13Q9NV06 445 aaKnown RBP2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 DPM3Q9P2X0 92 aa2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 BARX2Q9UMQ3 279 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P49-201ENST00000418882 WI2-2373I1.2A0A1W2PRP0 233 aa2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 IGHV3-23P01764 117 aa2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 CCDC166P0CW27 439 aa2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 HPDP32754 393 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 STK19P49842 368 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 RPS6P62753 249 aaKnown RBP2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 IL1RL1Q01638 556 aa2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 PUDPQ08623 228 aa2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 GALNT17Q6IS24 598 aa2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 ZNF530Q6P9A1 599 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 PARGQ86W56 976 aa2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 GPBP1Q86WP2 473 aa2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 ERICH1Q86X53 443 aa2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 ARFGAP2Q8N6H7 521 aa2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 EXOC6Q8TAG9 804 aa2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 ARNTL2Q8WYA1 636 aa2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 TMEM237Q96Q45 408 aa2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 TSPAN18Q96SJ8 248 aa2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 NAP1L3Q99457 506 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 NMUR2Q9GZQ4 415 aa2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 EXOSC3Q9NQT5 275 aaKnown RBP2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 HMG20BQ9P0W2 317 aa2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 TRIM10Q9UDY6 481 aa2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 CCPG1Q9ULG6 757 aa2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 FZR1Q9UM11 496 aa2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
HMGB1P49-201ENST00000418882 TRBV7-9A0A0J9YWB2 115 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 RTL8CO15255 209 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 PGK2P07205 417 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 GSTA1P08263 222 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 MGMTP16455 207 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 STMN1P16949 149 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 SDC1P18827 310 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 ZP3P21754 424 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 AKT2P31751 481 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 SLC6A8P48029 635 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 TRPC1P48995 793 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 NT5C2P49902 561 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 RPS8P62241 208 aaKnown RBP2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 GNB2P62879 340 aa2.97□□□□□ -1.93
HMGB1P49-201ENST00000418882 ZP4Q12836 540 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms