RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 KRTCAP3Q53RY4 240 aa21.21■□□□□ 0.99
SMARCB1-205ENST00000417137 PRAMEF20Q5VT98 475 aa21.21■□□□□ 0.99
SMARCB1-205ENST00000417137 TMEM81Q6P7N7 255 aa21.21■□□□□ 0.99
SMARCB1-205ENST00000417137 MSANTD1Q6ZTZ1 278 aa21.21■□□□□ 0.99
SMARCB1-205ENST00000417137 WDR53Q7Z5U6 358 aaPredicted RBP21.21■□□□□ 0.99
SMARCB1-205ENST00000417137 OR4N2Q8NGD1 307 aa21.21■□□□□ 0.99
SMARCB1-205ENST00000417137 JADE3Q92613 823 aa21.21■□□□□ 0.99
SMARCB1-205ENST00000417137 HGDQ93099 445 aa21.21■□□□□ 0.99
SMARCB1-205ENST00000417137 CHMP6Q96FZ7 201 aa21.21■□□□□ 0.99
SMARCB1-205ENST00000417137 PANX1Q96RD7 426 aa21.21■□□□□ 0.99
SMARCB1-205ENST00000417137 STACQ99469 402 aa21.21■□□□□ 0.99
SMARCB1-205ENST00000417137 SLX1AQ9BQ83 275 aa21.21■□□□□ 0.99
SMARCB1-205ENST00000417137 DOHHQ9BU89 302 aa21.21■□□□□ 0.99
SMARCB1-205ENST00000417137 METTL7AQ9H8H3 244 aa21.21■□□□□ 0.99
SMARCB1-205ENST00000417137 BOKQ9UMX3 212 aaPredicted RBP21.21■□□□□ 0.99
SMARCB1-205ENST00000417137 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.21■□□□□ 0.99
SMARCB1-205ENST00000417137 HS6ST1O60243 411 aa21.2■□□□□ 0.98
SMARCB1-205ENST00000417137 UGT2B11O75310 529 aa21.2■□□□□ 0.98
SMARCB1-205ENST00000417137 CASP3P42574 277 aa21.2■□□□□ 0.98
SMARCB1-205ENST00000417137 DNASE1L1P49184 302 aa21.2■□□□□ 0.98
SMARCB1-205ENST00000417137 ARFIP2P53365 341 aa21.2■□□□□ 0.98
SMARCB1-205ENST00000417137 SNTA1Q13424 505 aa21.2■□□□□ 0.98
SMARCB1-205ENST00000417137 SQLEQ14534 574 aa21.2■□□□□ 0.98
SMARCB1-205ENST00000417137 CDC73Q6P1J9 531 aa21.2■□□□□ 0.98
SMARCB1-205ENST00000417137 BNC2Q6ZN30 1099 aaPredicted RBP21.2■□□□□ 0.98
SMARCB1-205ENST00000417137 C6orf120Q7Z4R8 191 aa21.2■□□□□ 0.98
SMARCB1-205ENST00000417137 PACS2Q86VP3 889 aa21.2■□□□□ 0.98
SMARCB1-205ENST00000417137 SLC22A16Q86VW1 577 aa21.2■□□□□ 0.98
SMARCB1-205ENST00000417137 SLC16A11Q8NCK7 471 aa21.2■□□□□ 0.98
SMARCB1-205ENST00000417137 ST6GALNAC3Q8NDV1 305 aa21.2■□□□□ 0.98
SMARCB1-205ENST00000417137 OR5AK3PQ8NH89 298 aa21.2■□□□□ 0.98
SMARCB1-205ENST00000417137 GOT1L1Q8NHS2 421 aaPredicted RBP21.2■□□□□ 0.98
SMARCB1-205ENST00000417137 ADAMTS15Q8TE58 950 aa21.2■□□□□ 0.98
SMARCB1-205ENST00000417137 C16orf58Q96GQ5 468 aa21.2■□□□□ 0.98
SMARCB1-205ENST00000417137 YIPF4Q9BSR8 244 aa21.2■□□□□ 0.98
SMARCB1-205ENST00000417137 TMEM120AQ9BXJ8 343 aa21.2■□□□□ 0.98
SMARCB1-205ENST00000417137 ANGPTL4Q9BY76 406 aa21.2■□□□□ 0.98
SMARCB1-205ENST00000417137 IL1RL2Q9HB29 575 aa21.2■□□□□ 0.98
SMARCB1-205ENST00000417137 DUSP22Q9NRW4 184 aa21.2■□□□□ 0.98
SMARCB1-205ENST00000417137 MRGBPQ9NV56 204 aa21.2■□□□□ 0.98
SMARCB1-205ENST00000417137 RNF103-CHMP3A0A140T963 221 aa21.19■□□□□ 0.98
SMARCB1-205ENST00000417137 DUXAA6NLW8 204 aa21.19■□□□□ 0.98
SMARCB1-205ENST00000417137 TFECO14948 347 aaPredicted RBP21.19■□□□□ 0.98
SMARCB1-205ENST00000417137 IL33O95760 270 aa21.19■□□□□ 0.98
SMARCB1-205ENST00000417137 ACP2P11117 423 aa21.19■□□□□ 0.98
SMARCB1-205ENST00000417137 KCNK10P57789 538 aa21.19■□□□□ 0.98
SMARCB1-205ENST00000417137 PPIAP62937 165 aaKnown RBP21.19■□□□□ 0.98
SMARCB1-205ENST00000417137 SLC30A6Q6NXT4 461 aa21.19■□□□□ 0.98
SMARCB1-205ENST00000417137 COX18Q8N8Q8 333 aa21.19■□□□□ 0.98
SMARCB1-205ENST00000417137 OR9I1Q8NGQ6 314 aa21.19■□□□□ 0.98
SMARCB1-205ENST00000417137 EFHD2Q96C19 240 aaPredicted RBP21.19■□□□□ 0.98
SMARCB1-205ENST00000417137 ITCHQ96J02 903 aa21.19■□□□□ 0.98
SMARCB1-205ENST00000417137 PIGUQ9H490 435 aa21.19■□□□□ 0.98
SMARCB1-205ENST00000417137 GPATCH2Q9NW75 528 aa21.19■□□□□ 0.98
SMARCB1-205ENST00000417137 NPIPA5E9PKD4 350 aa21.18■□□□□ 0.98
SMARCB1-205ENST00000417137 RFXANKO14593 260 aa21.18■□□□□ 0.98
SMARCB1-205ENST00000417137 CBX6O95503 412 aa21.18■□□□□ 0.98
SMARCB1-205ENST00000417137 MST1P26927 711 aa21.18■□□□□ 0.98
SMARCB1-205ENST00000417137 CHI3L1P36222 383 aaPredicted RBP21.18■□□□□ 0.98
SMARCB1-205ENST00000417137 RFC3P40938 356 aa21.18■□□□□ 0.98
SMARCB1-205ENST00000417137 KCNC4Q03721 635 aa21.18■□□□□ 0.98
SMARCB1-205ENST00000417137 DUSP5Q16690 384 aa21.18■□□□□ 0.98
SMARCB1-205ENST00000417137 ZNF621Q6ZSS3 439 aa21.18■□□□□ 0.98
SMARCB1-205ENST00000417137 FBXO30Q8TB52 745 aa21.18■□□□□ 0.98
SMARCB1-205ENST00000417137 PIK3R3Q92569 461 aa21.18■□□□□ 0.98
SMARCB1-205ENST00000417137 RMND5BQ96G75 393 aaPredicted RBP21.18■□□□□ 0.98
SMARCB1-205ENST00000417137 ZNF317Q96PQ6 595 aaPredicted RBP21.18■□□□□ 0.98
SMARCB1-205ENST00000417137 NODALQ96S42 347 aa21.18■□□□□ 0.98
SMARCB1-205ENST00000417137 G6PC3Q9BUM1 346 aa21.18■□□□□ 0.98
SMARCB1-205ENST00000417137 BTBD2Q9BX70 525 aa21.18■□□□□ 0.98
SMARCB1-205ENST00000417137 TTTY12Q9BZ98 90 aa21.18■□□□□ 0.98
SMARCB1-205ENST00000417137 ZFP64Q9NPA5 681 aa21.18■□□□□ 0.98
SMARCB1-205ENST00000417137 TUBA8Q9NY65 449 aaPredicted RBP21.18■□□□□ 0.98
SMARCB1-205ENST00000417137 KLRF1Q9NZS2 232 aa21.18■□□□□ 0.98
SMARCB1-205ENST00000417137 SEC14L3Q9UDX4 400 aa21.18■□□□□ 0.98
SMARCB1-205ENST00000417137 NPIPA1Q9UND3 350 aa21.18■□□□□ 0.98
SMARCB1-205ENST00000417137 MAST4O15021 2626 aa21.18■□□□□ 0.98
SMARCB1-205ENST00000417137 A0A0G2JMM0 328 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 A0A1W2PPB8 328 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 A0A1W2PRS3 328 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 GXYLT2A0PJZ3 443 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 PINLYPA6NC86 204 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 ANKUB1A6NFN9 424 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 PRAMEF25A6NGN4 478 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 CCDC154A6NI56 674 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 KIR3DP1A8MWS1 328 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 WISP1O95388 367 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 MATN1P21941 496 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 LCN1P31025 176 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 ZFP36L2P47974 494 aaKnown RBP21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 RFX3P48380 749 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 MASP1P48740 699 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 CLK3P49761 638 aaKnown RBP21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 POU6F2P78424 691 aaPredicted RBP21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 FOXO1Q12778 655 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 HYAL4Q2M3T9 481 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 TIGD2Q4W5G0 525 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 AGKQ53H12 422 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 EXOSC6Q5RKV6 272 aaKnown RBP21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 BLOC1S3Q6QNY0 202 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms