RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 IFT81Q8WYA0 676 aa14.04□□□□□ -0.16
CPNE1-208ENST00000414711 GFM2Q969S9 779 aaKnown RBP14.04□□□□□ -0.16
CPNE1-208ENST00000414711 SORBS1Q9BX66 1292 aaKnown RBP14.04□□□□□ -0.16
CPNE1-208ENST00000414711 BHLHE41Q9C0J9 482 aaPredicted RBP14.04□□□□□ -0.16
CPNE1-208ENST00000414711 PRM3Q9NNZ6 103 aa14.04□□□□□ -0.16
CPNE1-208ENST00000414711 CBLN4Q9NTU7 201 aa14.04□□□□□ -0.16
CPNE1-208ENST00000414711 GLOD5A6NK44 160 aa14.03□□□□□ -0.16
CPNE1-208ENST00000414711 WASHC1A8K0Z3 465 aa14.03□□□□□ -0.16
CPNE1-208ENST00000414711 H7C417 338 aa14.03□□□□□ -0.16
CPNE1-208ENST00000414711 SAP18O00422 153 aaKnown RBP14.03□□□□□ -0.16
CPNE1-208ENST00000414711 CT62P0C5K7 136 aa14.03□□□□□ -0.16
CPNE1-208ENST00000414711 SLC35E2BP0CK96 405 aa14.03□□□□□ -0.16
CPNE1-208ENST00000414711 SLC35E2P0CK97 266 aa14.03□□□□□ -0.16
CPNE1-208ENST00000414711 IL11P20809 199 aa14.03□□□□□ -0.16
CPNE1-208ENST00000414711 IL32P24001 234 aa14.03□□□□□ -0.16
CPNE1-208ENST00000414711 BUD31P41223 144 aaPredicted RBP14.03□□□□□ -0.16
CPNE1-208ENST00000414711 SLC6A8P48029 635 aa14.03□□□□□ -0.16
CPNE1-208ENST00000414711 HNMTP50135 292 aa14.03□□□□□ -0.16
CPNE1-208ENST00000414711 PLTPP55058 493 aa14.03□□□□□ -0.16
CPNE1-208ENST00000414711 HNRNPH2P55795 449 aaKnown RBP14.03□□□□□ -0.16
CPNE1-208ENST00000414711 CLDN20P56880 219 aa14.03□□□□□ -0.16
CPNE1-208ENST00000414711 RPS3AP61247 264 aaKnown RBP14.03□□□□□ -0.16
CPNE1-208ENST00000414711 ERCC6LQ2NKX8 1250 aa14.03□□□□□ -0.16
CPNE1-208ENST00000414711 HSP90AA5PQ58FG0 334 aa14.03□□□□□ -0.16
CPNE1-208ENST00000414711 METTL25Q8N6Q8 603 aa14.03□□□□□ -0.16
CPNE1-208ENST00000414711 LRRC17Q8N6Y2 441 aa14.03□□□□□ -0.16
CPNE1-208ENST00000414711 GBP7Q8N8V2 638 aaPredicted RBP14.03□□□□□ -0.16
CPNE1-208ENST00000414711 EIF1ADQ8N9N8 165 aaKnown RBP14.03□□□□□ -0.16
CPNE1-208ENST00000414711 PIWIL2Q8TC59 973 aaKnown RBP14.03□□□□□ -0.16
CPNE1-208ENST00000414711 HSD17B8Q92506 261 aa14.03□□□□□ -0.16
CPNE1-208ENST00000414711 SERPINB12Q96P63 405 aa14.03□□□□□ -0.16
CPNE1-208ENST00000414711 TSPYL1Q9H0U9 437 aa14.03□□□□□ -0.16
CPNE1-208ENST00000414711 FOLH1BQ9HBA9 442 aa14.03□□□□□ -0.16
CPNE1-208ENST00000414711 IARS2Q9NSE4 1012 aaKnown RBP14.03□□□□□ -0.16
CPNE1-208ENST00000414711 GPRC5BQ9NZH0 403 aa14.03□□□□□ -0.16
CPNE1-208ENST00000414711 ARMCX1Q9P291 453 aa14.03□□□□□ -0.16
CPNE1-208ENST00000414711 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.03□□□□□ -0.16
CPNE1-208ENST00000414711 V9GYY5 206 aaPredicted RBP14.03□□□□□ -0.16
CPNE1-208ENST00000414711 PLCE1Q9P212 2302 aa14.02□□□□□ -0.16
CPNE1-208ENST00000414711 NPEPPSL1A6NEC2 478 aa14.02□□□□□ -0.17
CPNE1-208ENST00000414711 VWC2LB2RUY7 222 aa14.02□□□□□ -0.17
CPNE1-208ENST00000414711 B4DXG7 233 aa14.02□□□□□ -0.17
CPNE1-208ENST00000414711 H3BML4 177 aa14.02□□□□□ -0.17
CPNE1-208ENST00000414711 GOLGA8MH3BSY2 632 aa14.02□□□□□ -0.17
CPNE1-208ENST00000414711 PRAMEF4O60810 478 aa14.02□□□□□ -0.17
CPNE1-208ENST00000414711 GRK2P25098 689 aa14.02□□□□□ -0.17
CPNE1-208ENST00000414711 TTKP33981 857 aa14.02□□□□□ -0.17
CPNE1-208ENST00000414711 DSCR4P56555 118 aaPredicted RBP14.02□□□□□ -0.17
CPNE1-208ENST00000414711 ARL4CP56559 192 aa14.02□□□□□ -0.17
CPNE1-208ENST00000414711 CDKL1Q00532 357 aa14.02□□□□□ -0.17
CPNE1-208ENST00000414711 SGCBQ16585 318 aa14.02□□□□□ -0.17
CPNE1-208ENST00000414711 PRAMEF9Q5VWM5 478 aa14.02□□□□□ -0.17
CPNE1-208ENST00000414711 PDIK1LQ8N165 341 aa14.02□□□□□ -0.17
CPNE1-208ENST00000414711 C2CD4AQ8NCU7 369 aaPredicted RBP14.02□□□□□ -0.17
CPNE1-208ENST00000414711 OR4K17Q8NGC6 315 aa14.02□□□□□ -0.17
CPNE1-208ENST00000414711 PTCD3Q96EY7 689 aaKnown RBP14.02□□□□□ -0.17
CPNE1-208ENST00000414711 PIMREGQ9BSJ6 248 aa14.02□□□□□ -0.17
CPNE1-208ENST00000414711 HDHD5Q9BXW7 423 aa14.02□□□□□ -0.17
CPNE1-208ENST00000414711 CAPS2Q9BXY5 557 aa14.02□□□□□ -0.17
CPNE1-208ENST00000414711 POTEKPQ9BYX7 375 aa14.02□□□□□ -0.17
CPNE1-208ENST00000414711 PRRG4Q9BZD6 226 aa14.02□□□□□ -0.17
CPNE1-208ENST00000414711 ANKZF1Q9H8Y5 726 aa14.02□□□□□ -0.17
CPNE1-208ENST00000414711 XPR1Q9UBH6 696 aa14.02□□□□□ -0.17
CPNE1-208ENST00000414711 METRNQ9UJH8 293 aa14.02□□□□□ -0.17
CPNE1-208ENST00000414711 ZNF337Q9Y3M9 751 aa14.02□□□□□ -0.17
CPNE1-208ENST00000414711 IGHV4-61A0A0C4DH41 118 aa14.01□□□□□ -0.17
CPNE1-208ENST00000414711 A0A1W2PS29 197 aa14.01□□□□□ -0.17
CPNE1-208ENST00000414711 MAGEB16A2A368 324 aa14.01□□□□□ -0.17
CPNE1-208ENST00000414711 CLGNO14967 610 aa14.01□□□□□ -0.17
CPNE1-208ENST00000414711 LY6HO94772 140 aa14.01□□□□□ -0.17
CPNE1-208ENST00000414711 NR2F6P10588 404 aa14.01□□□□□ -0.17
CPNE1-208ENST00000414711 CD22P20273 847 aa14.01□□□□□ -0.17
CPNE1-208ENST00000414711 NR4A2P43354 598 aa14.01□□□□□ -0.17
CPNE1-208ENST00000414711 EFNA4P52798 201 aa14.01□□□□□ -0.17
CPNE1-208ENST00000414711 TRADDQ15628 312 aa14.01□□□□□ -0.17
CPNE1-208ENST00000414711 DEPDC1Q5TB30 811 aa14.01□□□□□ -0.17
CPNE1-208ENST00000414711 OR4C11Q6IEV9 310 aa14.01□□□□□ -0.17
CPNE1-208ENST00000414711 ZDHHC24Q6UX98 284 aa14.01□□□□□ -0.17
CPNE1-208ENST00000414711 TREML4Q6UXN2 200 aa14.01□□□□□ -0.17
CPNE1-208ENST00000414711 OR7G1Q8NGA0 311 aa14.01□□□□□ -0.17
CPNE1-208ENST00000414711 FBXO25Q8TCJ0 367 aa14.01□□□□□ -0.17
CPNE1-208ENST00000414711 ZNF473Q8WTR7 871 aaKnown RBP14.01□□□□□ -0.17
CPNE1-208ENST00000414711 FAM216AQ8WUB2 273 aa14.01□□□□□ -0.17
CPNE1-208ENST00000414711 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.01□□□□□ -0.173e-13■■■■■ 108.9
CPNE1-208ENST00000414711 TMCO6Q96DC7 493 aa14.01□□□□□ -0.17
CPNE1-208ENST00000414711 EFCAB11Q9BUY7 163 aa14.01□□□□□ -0.17
CPNE1-208ENST00000414711 ITPAQ9BY32 194 aa14.01□□□□□ -0.17
CPNE1-208ENST00000414711 C12orf49Q9H741 205 aa14.01□□□□□ -0.17
CPNE1-208ENST00000414711 ZDHHC18Q9NUE0 388 aa14.01□□□□□ -0.17
CPNE1-208ENST00000414711 TMEFF2Q9UIK5 374 aaPredicted RBP14.01□□□□□ -0.17
CPNE1-208ENST00000414711 VWFP04275 2813 aa14□□□□□ -0.17
CPNE1-208ENST00000414711 ABCD4O14678 606 aa14□□□□□ -0.17
CPNE1-208ENST00000414711 ACOX3O15254 700 aa14□□□□□ -0.17
CPNE1-208ENST00000414711 TP73O15350 636 aa14□□□□□ -0.17
CPNE1-208ENST00000414711 EIF3HO15372 352 aaKnown RBP eCLIP14□□□□□ -0.177e-7■■□□□ 14.2
CPNE1-208ENST00000414711 GCM2O75603 506 aaPredicted RBP14□□□□□ -0.17
CPNE1-208ENST00000414711 TGFB1P01137 390 aa14□□□□□ -0.17
CPNE1-208ENST00000414711 GABRB3P28472 473 aa14□□□□□ -0.17
CPNE1-208ENST00000414711 AWAT1Q58HT5 328 aa14□□□□□ -0.17
CPNE1-208ENST00000414711 C6orf163Q5TEZ5 329 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms