RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 PTHP01270 115 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 ADRA2AP08913 450 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 PIPP12273 146 aaPredicted RBP18.78■□□□□ 0.6
USP39-204ENST00000409766 NT5EP21589 574 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 CDH3P22223 829 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 ALDH4A1P30038 563 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 AVPR1BP47901 424 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 MGAT2Q10469 447 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 TRAM2Q15035 370 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 SMAD2Q15796 467 aaKnown RBP18.78■□□□□ 0.6
USP39-204ENST00000409766 OR8J1Q8NGP2 316 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 RPL3LQ92901 407 aaKnown RBP18.78■□□□□ 0.6
USP39-204ENST00000409766 ANKRD9Q96BM1 317 aaPredicted RBP18.78■□□□□ 0.6
USP39-204ENST00000409766 LGALS12Q96DT0 336 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 Q96MT0 163 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 ANKRD19PQ9H560 264 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 ADAP2Q9NPF8 381 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 METTL12A8MUP2 240 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 CCNYL3P0C7X3 344 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 NME1P15531 152 aaKnown RBP18.78■□□□□ 0.6
USP39-204ENST00000409766 GSTM3P21266 225 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 FASLGP48023 281 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 RAB38P57729 211 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 NCS1P62166 190 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 ST3GAL3Q11203 375 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 ELOCQ15369 112 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 PLAG1Q6DJT9 500 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 PEX5LQ8IYB4 626 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 CRELD1Q96HD1 420 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 ZNF350Q9GZX5 532 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 MAT2BQ9NZL9 334 aa18.78■□□□□ 0.6
USP39-204ENST00000409766 AGAP5A6NIR3 686 aa18.77■□□□□ 0.6
USP39-204ENST00000409766 M0R3G1 203 aa18.77■□□□□ 0.6
USP39-204ENST00000409766 RDH16O75452 317 aa18.77■□□□□ 0.6
USP39-204ENST00000409766 IFI6P09912 130 aa18.77■□□□□ 0.6
USP39-204ENST00000409766 CD38P28907 300 aa18.77■□□□□ 0.6
USP39-204ENST00000409766 GIPRP48546 466 aa18.77■□□□□ 0.6
USP39-204ENST00000409766 RGS8P57771 180 aaPredicted RBP18.77■□□□□ 0.6
USP39-204ENST00000409766 HOXC5Q00444 222 aa18.77■□□□□ 0.6
USP39-204ENST00000409766 DUSP8Q13202 625 aa18.77■□□□□ 0.6
USP39-204ENST00000409766 CCNJQ5T5M9 372 aa18.77■□□□□ 0.6
USP39-204ENST00000409766 MCATQ8IVS2 390 aaKnown RBP18.77■□□□□ 0.6
USP39-204ENST00000409766 ARL14Q8N4G2 192 aa18.77■□□□□ 0.6
USP39-204ENST00000409766 IQCF1Q8N6M8 205 aa18.77■□□□□ 0.6
USP39-204ENST00000409766 CDRT4Q8N9R6 151 aa18.77■□□□□ 0.6
USP39-204ENST00000409766 AVL9Q8NBF6 648 aa18.77■□□□□ 0.6
USP39-204ENST00000409766 OR9A4Q8NGU2 314 aa18.77■□□□□ 0.6
USP39-204ENST00000409766 C9orf43Q8TAL5 461 aaPredicted RBP18.77■□□□□ 0.6
USP39-204ENST00000409766 DYNC2LI1Q8TCX1 351 aa18.77■□□□□ 0.6
USP39-204ENST00000409766 BORCS5Q969J3 196 aa18.77■□□□□ 0.6
USP39-204ENST00000409766 CTHRC1Q96CG8 243 aa18.77■□□□□ 0.6
USP39-204ENST00000409766 ANKHQ9HCJ1 492 aa18.77■□□□□ 0.6
USP39-204ENST00000409766 DUSP22Q9NRW4 184 aa18.77■□□□□ 0.6
USP39-204ENST00000409766 ZNF232Q9UNY5 417 aa18.77■□□□□ 0.6
USP39-204ENST00000409766 SLC9B1P1A6NJY1 282 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 ALOX5P09917 674 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 CT62P0C5K7 136 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 MAP3K8P41279 467 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 CDK5Q00535 292 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 LARS2Q15031 903 aaKnown RBP18.76■□□□□ 0.59
USP39-204ENST00000409766 AP1ARQ63HQ0 302 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 ZCCHC12Q6PEW1 402 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 ZNF836Q6ZNA1 936 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 SLCO6A1Q86UG4 719 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 TCEANCQ8N8B7 351 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 TAS2R16Q9NYV7 291 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 DNAJC27Q9NZQ0 273 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 SATB2Q9UPW6 733 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 CLCA2Q9UQC9 943 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 CENPVL1A0A0U1RR11 272 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 AP3D1O14617 1153 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 THBS1P07996 1170 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 CALRP27797 417 aaKnown RBP18.76■□□□□ 0.59
USP39-204ENST00000409766 IFNGR2P38484 337 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 EEF1A1P68104 462 aaKnown RBP18.76■□□□□ 0.59
USP39-204ENST00000409766 GINS1Q14691 196 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 UBXN2BQ14CS0 331 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 OCLNQ16625 522 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 PRTGQ2VWP7 1150 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 KLHL35Q6PF15 583 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 PRICKLE2Q7Z3G6 844 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 SLC46A3Q7Z3Q1 461 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 KIF18BQ86Y91 864 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 GNPDA2Q8TDQ7 276 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 STACQ99469 402 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 MCHR1Q99705 422 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 POLDIP3Q9BY77 421 aaKnown RBP18.76■□□□□ 0.59
USP39-204ENST00000409766 SAP130Q9H0E3 1048 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 TVP23BQ9NYZ1 205 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 NTNG1Q9Y2I2 539 aa18.76■□□□□ 0.59
USP39-204ENST00000409766 USP34Q70CQ2 3546 aa18.75■□□□□ 0.59
USP39-204ENST00000409766 EFCAB9A8MZ26 197 aa18.75■□□□□ 0.59
USP39-204ENST00000409766 CHST10O43529 356 aa18.75■□□□□ 0.59
USP39-204ENST00000409766 CNOT3O75175 753 aaKnown RBP18.75■□□□□ 0.59
USP39-204ENST00000409766 THY1P04216 161 aa18.75■□□□□ 0.59
USP39-204ENST00000409766 RPS4Y1P22090 263 aaKnown RBP18.75■□□□□ 0.59
USP39-204ENST00000409766 MAOBP27338 520 aa18.75■□□□□ 0.59
USP39-204ENST00000409766 IFNA8P32881 189 aa18.75■□□□□ 0.59
USP39-204ENST00000409766 EFNB1P98172 346 aa18.75■□□□□ 0.59
USP39-204ENST00000409766 EXOSC7Q15024 291 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms