RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 H6PDO95479 791 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 FHP07954 510 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 PRPS2P11908 318 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 EPORP19235 508 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 GGT1P19440 569 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 KLK2P20151 261 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 MYF6P23409 242 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 HNRNPFP52597 415 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 DGKQP52824 942 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 DLX5P56178 289 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 AP1S2P56377 157 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 MEF2AQ02078 507 aaPredicted RBP11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 SNTB1Q13884 538 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 KCTD21Q4G0X4 260 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 GLYATQ6IB77 296 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 TMEM211Q6ICI0 200 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 IFNEQ86WN2 208 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 RIMKLAQ8IXN7 391 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 LIX1Q8N485 282 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 L3MBTL4Q8NA19 623 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 ZNF740Q8NDX6 193 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 OR52E4Q8NGH9 312 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 RND1Q92730 232 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 GTF2H4Q92759 462 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 POP5Q969H6 163 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 THAP11Q96EK4 314 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 OR1F2PQ96R84 312 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 HBEGFQ99075 208 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 PRPF18Q99633 342 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 SH3GL1Q99961 368 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 ATG10Q9H0Y0 220 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 ACTR8Q9H981 624 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 CCDC177Q9NQR7 707 aaPredicted RBP11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 DEPPQ9NTK1 212 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 SNX6Q9UNH7 406 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 MYRFQ9Y2G1 1151 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 SLC22A7Q9Y694 548 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 DNAJC13O75165 2243 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 PABPN1LA6NDY0 278 aaKnown RBP11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 GALR3O60755 368 aaPredicted RBP11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 SEC22BO75396 215 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 HIST1H2AGP0C0S8 130 aaPredicted RBP11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 NCK1P16333 377 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 HIST1H2ADP20671 130 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 MAOAP21397 527 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 MAPK1P28482 360 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 TUBA4AP68366 448 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 HMGCS1Q01581 520 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 MYBPHQ13203 477 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 SELPLGQ14242 412 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 KRT80Q6KB66 452 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 ALDH16A1Q8IZ83 802 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 METTL25Q8N6Q8 603 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 ZFP62Q8NB50 900 aaPredicted RBP11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 POGLUT1Q8NBL1 392 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 MFSD9Q8NBP5 474 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 TSPAN14Q8NG11 270 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 TBC1D20Q96BZ9 403 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 FBXL8Q96CD0 374 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 RMND5BQ96G75 393 aaPredicted RBP11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 HIST1H2AHQ96KK5 128 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 PTCHD1Q96NR3 888 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 HIST1H2AJQ99878 128 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 FOXC2Q99958 501 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 H2AFJQ9BTM1 129 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 RBM38Q9H0Z9 239 aaKnown RBP11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 TP63Q9H3D4 680 aaPredicted RBP11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 GORASP2Q9H8Y8 452 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 VCX3AQ9NNX9 186 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 NECTIN3Q9NQS3 549 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 FARSBQ9NSD9 589 aaKnown RBP11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 KCNN3Q9UGI6 736 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 ZNF223Q9UK11 482 aaPredicted RBP11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 OAZ3Q9UMX2 235 aa11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 KLF13Q9Y2Y9 288 aaPredicted RBP11.75□□□□□ -0.53
CHRNA1-205ENST00000409542 TRBV5-3A0A0A0MS03 114 aa11.74□□□□□ -0.53
CHRNA1-205ENST00000409542 FAM221AA4D161 298 aa11.74□□□□□ -0.53
CHRNA1-205ENST00000409542 SAGE2PA6NJ88 616 aa11.74□□□□□ -0.53
CHRNA1-205ENST00000409542 KLRC4-KLRK1H3BQV0 150 aa11.74□□□□□ -0.53
CHRNA1-205ENST00000409542 TPST1O60507 370 aa11.74□□□□□ -0.53
CHRNA1-205ENST00000409542 PRMT3O60678 531 aa11.74□□□□□ -0.53
CHRNA1-205ENST00000409542 GMNNO75496 209 aa11.74□□□□□ -0.53
CHRNA1-205ENST00000409542 PRSS23O95084 383 aa11.74□□□□□ -0.53
CHRNA1-205ENST00000409542 BCKDHAP12694 445 aa11.74□□□□□ -0.53
CHRNA1-205ENST00000409542 ZNF23P17027 643 aa11.74□□□□□ -0.53
CHRNA1-205ENST00000409542 HOXB6P17509 224 aaKnown RBP11.74□□□□□ -0.53
CHRNA1-205ENST00000409542 CLDN8P56748 225 aa11.74□□□□□ -0.53
CHRNA1-205ENST00000409542 MTPNP58546 118 aa11.74□□□□□ -0.53
CHRNA1-205ENST00000409542 MERTKQ12866 999 aa11.74□□□□□ -0.53
CHRNA1-205ENST00000409542 HYAL2Q12891 473 aa11.74□□□□□ -0.53
CHRNA1-205ENST00000409542 FOXD4Q12950 439 aaPredicted RBP11.74□□□□□ -0.53
CHRNA1-205ENST00000409542 FAM174BQ3ZCQ3 159 aa11.74□□□□□ -0.53
CHRNA1-205ENST00000409542 SLC36A3Q495N2 470 aa11.74□□□□□ -0.53
CHRNA1-205ENST00000409542 DEFB134Q4QY38 66 aa11.74□□□□□ -0.53
CHRNA1-205ENST00000409542 RUNDC3AQ59EK9 446 aa11.74□□□□□ -0.53
CHRNA1-205ENST00000409542 C16orf47Q6ZP98 133 aaPredicted RBP11.74□□□□□ -0.53
CHRNA1-205ENST00000409542 MSANTD1Q6ZTZ1 278 aa11.74□□□□□ -0.53
CHRNA1-205ENST00000409542 LIX1LQ8IVB5 337 aa11.74□□□□□ -0.53
CHRNA1-205ENST00000409542 KLHDC8AQ8IYD2 350 aa11.74□□□□□ -0.53
CHRNA1-205ENST00000409542 ARMC10Q8N2F6 343 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms