RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 PPP4R1LQ9P1A2 415 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 STOML1Q9UBI4 398 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 TNFRSF10DQ9UBN6 386 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 Q9UFV3 132 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 MAPRE3Q9UPY8 281 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 MRPS18CQ9Y3D5 142 aaKnown RBP8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 NINQ8N4C6 2090 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 TSPAN2O60636 221 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 SOX30O94993 753 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 SNUPNO95149 360 aaKnown RBP8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 ZWINTO95229 277 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 GOSR1O95249 250 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 SLU7O95391 586 aaKnown RBP8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 HSPA4LO95757 839 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 IL18BPO95998 194 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 CPN1P15169 458 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 BMP7P18075 431 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 GRK2P25098 689 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 OPRM1P35372 400 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 HPCAL1P37235 193 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 MC3RP41968 323 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 CORO7P57737 925 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 EEFSECP57772 596 aaKnown RBP8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 RPL38P63173 70 aaKnown RBP8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 PCLAFQ15004 111 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 WIPI1Q5MNZ9 446 aaPredicted RBP8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 KANK2Q63ZY3 851 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 FAM180BQ6P0A1 224 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 WDR93Q6P2C0 686 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 TMEM107Q6UX40 140 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 CHMP1BQ7LBR1 199 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 TRABD2AQ86V40 505 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 KIF18BQ86Y91 864 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 DDIASQ8IXT1 998 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 ZNF295-AS1Q8N0V1 137 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 BANPQ8N9N5 519 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 LRRN4CLQ8ND94 238 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 OR7G2Q8NG99 324 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 GOT1L1Q8NHS2 421 aaPredicted RBP8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 CAVIN3Q969G5 261 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 NTNG2Q96CW9 530 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 SFXN2Q96NB2 322 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 AMDHD1Q96NU7 426 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 FAM111AQ96PZ2 611 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 TRIB1Q96RU8 372 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 GATA5Q9BWX5 397 aaPredicted RBP8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 UGT2B28Q9BY64 529 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 GLIPR2Q9H4G4 154 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 REEP4Q9H6H4 257 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 ANKZF1Q9H8Y5 726 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 SERHLQ9NQF3 203 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 NPDC1Q9NQX5 325 aaPredicted RBP8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 ACSS1Q9NUB1 689 aaPredicted RBP8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 ATAD3AQ9NVI7 634 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 FAM120CQ9NX05 1096 aaKnown RBP8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 TAS2R10Q9NYW0 307 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 CBLCQ9ULV8 474 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 SLC6A5Q9Y345 797 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 INTS1Q8N201 2190 aaKnown RBP8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 ANKHD1Q8IWZ3 2542 aaKnown RBP8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 ADGRG4Q8IZF6 3080 aa8.28□□□□□ -1.08
SNORD88A-201ENST00000408314 MBD3L4A6NDZ8 208 aaPredicted RBP8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 MBD3L3A6NE82 208 aaPredicted RBP8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 MBD3L5A6NJ08 208 aaPredicted RBP8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 LYPLA1O75608 230 aaPredicted RBP8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 PSMG1O95456 288 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 IL33O95760 270 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 FGF4P08620 206 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 KRT16P08779 473 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 PRPS2P11908 318 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 LCN1P31025 176 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 UQCRC1P31930 480 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 CEACAM8P31997 349 aaPredicted RBP8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 EVI2BP34910 448 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 ADH7P40394 386 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 PTGDSP41222 190 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 MANFP55145 182 aaKnown RBP8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 DSCR4P56555 118 aaPredicted RBP8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 VSNL1P62760 191 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 PRR5P85299 388 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 PSG6Q00889 435 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 MAD2L1Q13257 205 aaPredicted RBP8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 GAB1Q13480 694 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 BCL2A1Q16548 175 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 FBXL19-AS1Q494R0 122 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 ATP6AP1LQ52LC2 224 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 EIPR1Q53HC9 387 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 SH2D4BQ5SQS7 431 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 CLEC6AQ6EIG7 209 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 ZCCHC12Q6PEW1 402 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 ARSKQ6UWY0 536 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 NPSR1Q6W5P4 371 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 YRDCQ86U90 279 aaKnown RBP8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 CDH24Q86UP0 819 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 TMEM200AQ86VY9 491 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 MREGQ8N565 214 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 MEIOBQ8N635 442 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 CDRT4Q8N9R6 151 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 MBD3L2Q8NHZ7 208 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms