RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 CDC73Q6P1J9 531 aa15.77■□□□□ 0.11
NUP50-203ENST00000407019 PLEKHM3Q6ZWE6 761 aa15.77■□□□□ 0.11
NUP50-203ENST00000407019 SAMD14Q8IZD0 417 aaPredicted RBP15.77■□□□□ 0.11
NUP50-203ENST00000407019 ZCCHC10Q8TBK6 192 aa15.77■□□□□ 0.11
NUP50-203ENST00000407019 SIPA1Q96FS4 1042 aa15.77■□□□□ 0.11
NUP50-203ENST00000407019 TRMT61AQ96FX7 289 aaKnown RBP15.77■□□□□ 0.11
NUP50-203ENST00000407019 FAM46AQ96IP4 442 aaKnown RBP15.77■□□□□ 0.11
NUP50-203ENST00000407019 SERINC2Q96SA4 455 aa15.77■□□□□ 0.11
NUP50-203ENST00000407019 POLMQ9NP87 494 aaPredicted RBP15.77■□□□□ 0.11
NUP50-203ENST00000407019 CNIH4Q9P003 139 aa15.77■□□□□ 0.11
NUP50-203ENST00000407019 NTMQ9P121 344 aa15.77■□□□□ 0.11
NUP50-203ENST00000407019 PCOLCE2Q9UKZ9 415 aa15.77■□□□□ 0.11
NUP50-203ENST00000407019 SNRNP200O75643 2136 aaKnown RBP15.76■□□□□ 0.11
NUP50-203ENST00000407019 TRBV23OR9-2A0A075B6M9 112 aa15.76■□□□□ 0.11
NUP50-203ENST00000407019 H0Y8X5 98 aa15.76■□□□□ 0.11
NUP50-203ENST00000407019 WWP2O00308 870 aa15.76■□□□□ 0.11
NUP50-203ENST00000407019 OMPP47874 163 aa15.76■□□□□ 0.11
NUP50-203ENST00000407019 EIF2B2P49770 351 aaKnown RBP15.76■□□□□ 0.11
NUP50-203ENST00000407019 RORCP51449 518 aa15.76■□□□□ 0.11
NUP50-203ENST00000407019 RGS8P57771 180 aaPredicted RBP15.76■□□□□ 0.11
NUP50-203ENST00000407019 HYAL1Q12794 435 aa15.76■□□□□ 0.11
NUP50-203ENST00000407019 RAB40BQ12829 278 aa15.76■□□□□ 0.11
NUP50-203ENST00000407019 KRR1Q13601 381 aaKnown RBP15.76■□□□□ 0.11
NUP50-203ENST00000407019 SHHQ15465 462 aa15.76■□□□□ 0.11
NUP50-203ENST00000407019 PRRT3Q5FWE3 981 aa15.76■□□□□ 0.11
NUP50-203ENST00000407019 FBXO42Q6P3S6 717 aa15.76■□□□□ 0.11
NUP50-203ENST00000407019 CCL4L1Q8NHW4 92 aa15.76■□□□□ 0.11
NUP50-203ENST00000407019 FLVCR1-AS1Q8TAF5 88 aa15.76■□□□□ 0.11
NUP50-203ENST00000407019 CDS1Q92903 461 aa15.76■□□□□ 0.11
NUP50-203ENST00000407019 TSACCQ96A04 125 aaPredicted RBP15.76■□□□□ 0.11
NUP50-203ENST00000407019 COL26A1Q96A83 441 aa15.76■□□□□ 0.11
NUP50-203ENST00000407019 RNFT2Q96EX2 444 aa15.76■□□□□ 0.11
NUP50-203ENST00000407019 SLC30A2Q9BRI3 323 aa15.76■□□□□ 0.11
NUP50-203ENST00000407019 NKX2-4Q9H2Z4 354 aa15.76■□□□□ 0.11
NUP50-203ENST00000407019 CACYBPQ9HB71 228 aaKnown RBP15.76■□□□□ 0.11
NUP50-203ENST00000407019 FGF20Q9NP95 211 aaPredicted RBP15.76■□□□□ 0.11
NUP50-203ENST00000407019 ZNF443Q9Y2A4 671 aaPredicted RBP15.76■□□□□ 0.11
NUP50-203ENST00000407019 CAB39Q9Y376 341 aaPredicted RBP15.76■□□□□ 0.11
NUP50-203ENST00000407019 MDC1Q14676 2089 aaKnown RBP15.76■□□□□ 0.11
NUP50-203ENST00000407019 FCMRO60667 390 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 EGFP01133 1207 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 CPEP16870 476 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 MAGP20916 626 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 GAS1P54826 345 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 SNRPNP63162 240 aaKnown RBP15.75■□□□□ 0.11
NUP50-203ENST00000407019 MINDY4Q4G0A6 757 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 FRRS1Q6ZNA5 592 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 SLC16A11Q8NCK7 471 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 FLCNQ8NFG4 579 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 OR4K14Q8NGD5 310 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 ACOT11Q8WXI4 607 aaPredicted RBP15.75■□□□□ 0.11
NUP50-203ENST00000407019 SLC9A6Q92581 669 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 TM4SF19Q96DZ7 209 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 FAM210AQ96ND0 272 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 OR2A5Q96R48 311 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 BARHL1Q9BZE3 327 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 KCMF1Q9P0J7 381 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 ANKMY1Q9P2S6 941 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 CDH23Q9H251 3354 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 MN1Q10571 1320 aaPredicted RBP15.75■□□□□ 0.11
NUP50-203ENST00000407019 P2RX6O15547 441 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 NTN1O95631 604 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 APBB3O95704 486 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 LBX1P52954 281 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 WNT4P56705 351 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 DEFA1P59665 94 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 DEFA3P59666 94 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 HOXC5Q00444 222 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 MLLT1Q03111 559 aaPredicted RBP15.75■□□□□ 0.11
NUP50-203ENST00000407019 MAP4K2Q12851 820 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 DECR1Q16698 335 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 C11orf74Q86VG3 221 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 HPS1Q92902 700 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 OR2A14Q96R47 310 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 MCHR1Q99705 422 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 CCDC32Q9BV29 185 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 SNTG1Q9NSN8 517 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 CARD8Q9Y2G2 431 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 GPR52Q9Y2T5 361 aa15.75■□□□□ 0.11
NUP50-203ENST00000407019 TMEM129A0AVI4 362 aa15.74■□□□□ 0.11
NUP50-203ENST00000407019 URADA6NGE7 173 aa15.74■□□□□ 0.11
NUP50-203ENST00000407019 KDM4EB2RXH2 506 aaPredicted RBP15.74■□□□□ 0.11
NUP50-203ENST00000407019 RFXAPO00287 272 aa15.74■□□□□ 0.11
NUP50-203ENST00000407019 B3GALT2O43825 422 aa15.74■□□□□ 0.11
NUP50-203ENST00000407019 RASGRP1O95267 797 aa15.74■□□□□ 0.11
NUP50-203ENST00000407019 TSPAN19P0C672 248 aa15.74■□□□□ 0.11
NUP50-203ENST00000407019 SMIM10L1P0DMW3 83 aa15.74■□□□□ 0.11
NUP50-203ENST00000407019 UGT2B7P16662 529 aa15.74■□□□□ 0.11
NUP50-203ENST00000407019 FPR3P25089 353 aa15.74■□□□□ 0.11
NUP50-203ENST00000407019 TLX1P31314 330 aaPredicted RBP15.74■□□□□ 0.11
NUP50-203ENST00000407019 TNFSF8P32971 234 aa15.74■□□□□ 0.11
NUP50-203ENST00000407019 MTNR1AP48039 350 aa15.74■□□□□ 0.11
NUP50-203ENST00000407019 SIM1P81133 766 aaPredicted RBP15.74■□□□□ 0.11
NUP50-203ENST00000407019 PUS10Q3MIT2 529 aaKnown RBP15.74■□□□□ 0.11
NUP50-203ENST00000407019 DEFB134Q4QY38 66 aa15.74■□□□□ 0.11
NUP50-203ENST00000407019 NKAIN4Q8IVV8 208 aa15.74■□□□□ 0.11
NUP50-203ENST00000407019 PEX5LQ8IYB4 626 aa15.74■□□□□ 0.11
NUP50-203ENST00000407019 OR2L13Q8N349 312 aa15.74■□□□□ 0.11
NUP50-203ENST00000407019 ANKK1Q8NFD2 765 aa15.74■□□□□ 0.11
NUP50-203ENST00000407019 SLC41A3Q96GZ6 507 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms