RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 GSTT2P0CG29 244 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 GSTT2BP0CG30 244 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 PPIAL4GP0DN37 164 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 HNF1AP20823 631 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 MMP12P39900 470 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 RAG2P55895 527 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 CTAG1AP78358 180 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 NUCB2P80303 420 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 ZNF177Q13360 481 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 PDK3Q15120 406 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 FCN2Q15485 313 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 CEP85LQ5SZL2 805 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 TTC23Q5W5X9 447 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 AP1ARQ63HQ0 302 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 SEL1L3Q68CR1 1132 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 ZYG11AQ6WRX3 759 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 KIF6Q6ZMV9 814 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 ZNF841Q6ZN19 808 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 Q7L0L9 218 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 PARGQ86W56 976 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 KRTAP7-1Q8IUC3 87 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 ZNRF1Q8ND25 227 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 OR4F17Q8NGA8 305 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 PNPT1Q8TCS8 783 aaKnown RBP4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 PCNPQ8WW12 178 aaKnown RBP4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 EMG1Q92979 244 aaKnown RBP4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 FBXO17Q96EF6 278 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 ANKRD27Q96NW4 1050 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 RCHY1Q96PM5 261 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 OR4F4Q96R69 305 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 ZBTB18Q99592 522 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 NT5DC2Q9H857 520 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 POLD4Q9HCU8 107 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 C1orf123Q9NWV4 160 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 CHMP5Q9NZZ3 219 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 RNF14Q9UBS8 474 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 NOSIPQ9Y314 301 aaKnown RBP4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 FER1L5A0AVI2 2057 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 ZSCAN5BA6NJL1 495 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 MPTX1A8MV57 137 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 HHLA1C9JL84 531 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 KIF2AO00139 706 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 TRAFD1O14545 582 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 EI24O14681 340 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 DUSP11O75319 330 aaKnown RBP4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 ZNF24P17028 368 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 UQCRC2P22695 453 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 PSMA2P25787 234 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 PDHA2P29803 388 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 KRTAP10-5P60370 271 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 SNRPD1P62314 119 aaKnown RBP4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 NOP14P78316 857 aaKnown RBP4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 TNFRSF17Q02223 184 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 KIAA0141Q14154 515 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 CD226Q15762 336 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 CAMK4Q16566 473 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 ZNF876PQ49A33 203 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 BLOC1S2Q6QNY1 142 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 HACD2Q6Y1H2 254 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 MOB2Q70IA6 237 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 LUZP1Q86V48 1076 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 SLC7A5P1Q8MH63 180 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 CENPSQ8N2Z9 138 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 LRRC43Q8N309 656 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 ANKFN1Q8N957 763 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 WDSUB1Q8N9V3 476 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 SPPL2AQ8TCT8 520 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 RNF139Q8WU17 664 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 TAF15Q92804 592 aaKnown RBP eCLIP4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 LHX4Q969G2 390 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 UPRTQ96BW1 309 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 TUBGCP3Q96CW5 907 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 AKR1E2Q96JD6 320 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 ST6GALNAC5Q9BVH7 336 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 TBC1D10AQ9BXI6 508 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 GSDMCQ9BYG8 508 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 WDR13Q9H1Z4 485 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 DHX33Q9H6R0 707 aaKnown RBP4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 WDR41Q9HAD4 459 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 TM9SF3Q9HD45 589 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 APMAPQ9HDC9 416 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 MED4Q9NPJ6 270 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 B3GAT2Q9NPZ5 323 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 PLCXD1Q9NUJ7 323 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 THYN1Q9P016 225 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 BAIAP2L1Q9UHR4 511 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 CTNNA3Q9UI47 895 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 GSTK1Q9Y2Q3 226 aa4.08□□□□□ -1.76
HMGB1P13-201ENST00000406019 GSAPA4D1B5 854 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 TM9SF1O15321 606 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 DCXO43602 365 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 DUX1O43812 170 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 RANBP6O60518 1105 aaKnown RBP4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 IL1BP01584 269 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 IGHG1P01857 330 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 AOC1P19801 751 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 PRKACGP22612 351 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 SAA4P35542 130 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms