RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 PHC1P78364 1004 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 MRPS22P82650 360 aaKnown RBP9.74□□□□□ -0.85
RPAIN-204ENST00000405578 TXNL4AP83876 142 aaKnown RBP9.74□□□□□ -0.85
RPAIN-204ENST00000405578 KLF10Q13118 480 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 PIGGQ5H8A4 983 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 B3GNTL1Q67FW5 361 aaPredicted RBP9.74□□□□□ -0.85
RPAIN-204ENST00000405578 FCRLBQ6BAA4 426 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 IGFL3Q6UXB1 125 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 ANGPTL8Q6UXH0 198 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 FUNDC1Q8IVP5 155 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 GOT1L1Q8NHS2 421 aaPredicted RBP9.74□□□□□ -0.85
RPAIN-204ENST00000405578 JADE3Q92613 823 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 HAS2Q92819 552 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 TMEM125Q96AQ2 219 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 HSPBAP1Q96EW2 488 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 VSTM2LQ96N03 204 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 LRRC37BQ96QE4 947 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 BARD1Q99728 777 aaKnown RBP9.74□□□□□ -0.85
RPAIN-204ENST00000405578 ITPAQ9BY32 194 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 RNF32Q9H0A6 362 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.74□□□□□ -0.85
RPAIN-204ENST00000405578 CXorf36Q9H7Y0 433 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 FOLH1BQ9HBA9 442 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 SIRT3Q9NTG7 399 aaPredicted RBP9.74□□□□□ -0.85
RPAIN-204ENST00000405578 HPF1Q9NWY4 346 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 ERVK-11Q9UQG0 969 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 ABCA2Q9BZC7 2435 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 CNTRLQ7Z7A1 2325 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 OR5H15A6NDH6 313 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 FRG2CA6NGY1 282 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 BBIP1A8MTZ0 92 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 TP53I11O14683 189 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 PRKNO60260 465 aaPredicted RBP9.73□□□□□ -0.85
RPAIN-204ENST00000405578 KCNH1O95259 989 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 PSMG1O95456 288 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 AGR2O95994 175 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 CLPSP04118 112 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 HMGN2P05204 90 aaKnown RBP9.73□□□□□ -0.85
RPAIN-204ENST00000405578 ALOX5P09917 674 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 ZCCHC18P0CG32 403 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 NAGAP17050 411 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 PPIBP23284 216 aaKnown RBP9.73□□□□□ -0.85
RPAIN-204ENST00000405578 TRHRP34981 398 aaPredicted RBP9.73□□□□□ -0.85
RPAIN-204ENST00000405578 PTGER4P35408 488 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 MAGEA8P43361 318 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 HLCSP50747 726 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 NR0B1P51843 470 aaKnown RBP9.73□□□□□ -0.85
RPAIN-204ENST00000405578 PLCXD2Q0VAA5 305 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 CYLC2Q14093 348 aaPredicted RBP9.73□□□□□ -0.85
RPAIN-204ENST00000405578 LASP1Q14847 261 aaKnown RBP9.73□□□□□ -0.85
RPAIN-204ENST00000405578 TLR1Q15399 786 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 TESK1Q15569 626 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 DECR1Q16698 335 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 CYP27C1Q4G0S4 372 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 COQ5Q5HYK3 327 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 MFSD12Q6NUT3 480 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 IGFL2Q6UWQ7 119 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 GK5Q6ZS86 529 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 C6orf120Q7Z4R8 191 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 FJX1Q86VR8 437 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 SLC44A2Q8IWA5 706 aaPredicted RBP9.73□□□□□ -0.85
RPAIN-204ENST00000405578 BEST3Q8N1M1 668 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 PCYOX1LQ8NBM8 494 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 OR5AK3PQ8NH89 298 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 BCAS4Q8TDM0 211 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 GPR151Q8TDV0 419 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 ADAMTS15Q8TE58 950 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 SLC9A6Q92581 669 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 GTF2H4Q92759 462 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 ADIPOR1Q96A54 375 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 CMTM5Q96DZ9 223 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 SGCZQ96LD1 299 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 BTBD9Q96Q07 612 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 RASL10BQ96S79 203 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 SLC35A5Q9BS91 424 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 ACTRT3Q9BYD9 372 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 RAD21L1Q9H4I0 556 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 ANKRA2Q9H9E1 313 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 AGPAT4Q9NRZ5 378 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 ARMCX1Q9P291 453 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 GPR55Q9Y2T6 319 aaPredicted RBP9.73□□□□□ -0.85
RPAIN-204ENST00000405578 PCDHGA10Q9Y5H3 936 aa9.73□□□□□ -0.85
RPAIN-204ENST00000405578 NIPBLQ6KC79 2804 aaeCLIP9.73□□□□□ -0.85
RPAIN-204ENST00000405578 CACNA1CQ13936 2221 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 A0A096LPI6 279 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 TRAV17A0A0B4J275 112 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 TMEM247A6NEH6 219 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 TO15178 435 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 HS6ST1O60243 411 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 WDPCPO95876 746 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 GSNP06396 782 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 CD46P15529 392 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 CAPN3P20807 821 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 IL12BP29460 328 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 GABRA3P34903 492 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 KHKP50053 298 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 TUBA3CQ13748 450 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 NNATQ16517 81 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 ATAD3BQ5T9A4 648 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 TUBA3EQ6PEY2 450 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms