RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 CNTRLQ7Z7A1 2325 aa27.03■■□□□ 1.92
USP42-202ENST00000404008 GXYLT2A0PJZ3 443 aa27.02■■□□□ 1.92
USP42-202ENST00000404008 SOX30O94993 753 aa27.02■■□□□ 1.92
USP42-202ENST00000404008 PIGAP37287 484 aa27.02■■□□□ 1.92
USP42-202ENST00000404008 NFYCQ13952 458 aa27.02■■□□□ 1.92
USP42-202ENST00000404008 Q6ZS92 163 aa27.02■■□□□ 1.92
USP42-202ENST00000404008 HORMAD2Q8N7B1 307 aa27.02■■□□□ 1.92
USP42-202ENST00000404008 CDS1Q92903 461 aa27.02■■□□□ 1.92
USP42-202ENST00000404008 OR51I1Q9H343 314 aa27.02■■□□□ 1.92
USP42-202ENST00000404008 ZFYVE26Q68DK2 2539 aa27.01■■□□□ 1.91
USP42-202ENST00000404008 DUXAA6NLW8 204 aa27.01■■□□□ 1.91
USP42-202ENST00000404008 TSPAN2O60636 221 aa27.01■■□□□ 1.91
USP42-202ENST00000404008 KHKP50053 298 aa27.01■■□□□ 1.91
USP42-202ENST00000404008 MVDP53602 400 aa27.01■■□□□ 1.91
USP42-202ENST00000404008 FBXW4P57775 412 aa27.01■■□□□ 1.91
USP42-202ENST00000404008 MRPS22P82650 360 aaKnown RBP27.01■■□□□ 1.91
USP42-202ENST00000404008 FAM91A1Q658Y4 838 aa27.01■■□□□ 1.91
USP42-202ENST00000404008 TNFAIP8L2Q6P589 184 aaPredicted RBP27.01■■□□□ 1.91
USP42-202ENST00000404008 RTL4Q6ZR62 310 aa27.01■■□□□ 1.91
USP42-202ENST00000404008 MDGA2Q7Z553 956 aa27.01■■□□□ 1.91
USP42-202ENST00000404008 BCORP1Q8N888 145 aa27.01■■□□□ 1.91
USP42-202ENST00000404008 COX18Q8N8Q8 333 aa27.01■■□□□ 1.91
USP42-202ENST00000404008 CMTM5Q96DZ9 223 aa27.01■■□□□ 1.91
USP42-202ENST00000404008 RMND5BQ96G75 393 aaPredicted RBP27.01■■□□□ 1.91
USP42-202ENST00000404008 SGCZQ96LD1 299 aa27.01■■□□□ 1.91
USP42-202ENST00000404008 BTBD2Q9BX70 525 aa27.01■■□□□ 1.91
USP42-202ENST00000404008 MFRPQ9BY79 579 aa27.01■■□□□ 1.91
USP42-202ENST00000404008 IL1RL2Q9HB29 575 aa27.01■■□□□ 1.91
USP42-202ENST00000404008 GMEB1Q9Y692 573 aa27.01■■□□□ 1.91
USP42-202ENST00000404008 KCNE3Q9Y6H6 103 aa27.01■■□□□ 1.91
USP42-202ENST00000404008 CLIC1O00299 241 aa27■■□□□ 1.91
USP42-202ENST00000404008 MRASO14807 208 aa27■■□□□ 1.91
USP42-202ENST00000404008 ASNA1O43681 348 aa27■■□□□ 1.91
USP42-202ENST00000404008 PRDX6P30041 224 aa27■■□□□ 1.91
USP42-202ENST00000404008 DECR1Q16698 335 aa27■■□□□ 1.91
USP42-202ENST00000404008 TRMT5Q32P41 509 aaKnown RBP27■■□□□ 1.91
USP42-202ENST00000404008 COX20Q5RI15 118 aa27■■□□□ 1.91
USP42-202ENST00000404008 FITM2Q8N6M3 262 aa27■■□□□ 1.91
USP42-202ENST00000404008 GOLM1Q8NBJ4 401 aa27■■□□□ 1.91
USP42-202ENST00000404008 FAM13CQ8NE31 585 aa27■■□□□ 1.91
USP42-202ENST00000404008 OR10G3Q8NGC4 313 aa27■■□□□ 1.91
USP42-202ENST00000404008 SH2D2AQ9NP31 389 aa27■■□□□ 1.91
USP42-202ENST00000404008 NIPSNAP3AQ9UFN0 247 aaPredicted RBP27■■□□□ 1.91
USP42-202ENST00000404008 B3GNT3Q9Y2A9 372 aa27■■□□□ 1.91
USP42-202ENST00000404008 PCDHGB3Q9Y5G1 929 aa27■■□□□ 1.91
USP42-202ENST00000404008 EML6Q6ZMW3 1958 aa27■■□□□ 1.91
USP42-202ENST00000404008 TRAV17A0A0B4J275 112 aa26.99■■□□□ 1.91
USP42-202ENST00000404008 OR6C70A6NIJ9 312 aa26.99■■□□□ 1.91
USP42-202ENST00000404008 REM1O75628 298 aa26.99■■□□□ 1.91
USP42-202ENST00000404008 SLC25A12O75746 678 aa26.99■■□□□ 1.91
USP42-202ENST00000404008 KCNK2O95069 426 aa26.99■■□□□ 1.91
USP42-202ENST00000404008 UNC5CO95185 931 aa26.99■■□□□ 1.91
USP42-202ENST00000404008 KRT20P35900 424 aa26.99■■□□□ 1.91
USP42-202ENST00000404008 MAGEA8P43361 318 aa26.99■■□□□ 1.91
USP42-202ENST00000404008 POU6F2P78424 691 aaPredicted RBP26.99■■□□□ 1.91
USP42-202ENST00000404008 TXNL4AP83876 142 aaKnown RBP26.99■■□□□ 1.91
USP42-202ENST00000404008 NADK2Q4G0N4 442 aa26.99■■□□□ 1.91
USP42-202ENST00000404008 DDX59Q5T1V6 619 aaKnown RBP eCLIP26.99■■□□□ 1.91
USP42-202ENST00000404008 PCYOX1LQ8NBM8 494 aa26.99■■□□□ 1.91
USP42-202ENST00000404008 OR52N2Q8NGI0 321 aa26.99■■□□□ 1.91
USP42-202ENST00000404008 OR5M3Q8NGP4 307 aa26.99■■□□□ 1.91
USP42-202ENST00000404008 FAM110BQ8TC76 370 aa26.99■■□□□ 1.91
USP42-202ENST00000404008 DIO2Q92813 273 aa26.99■■□□□ 1.91
USP42-202ENST00000404008 EFHD2Q96C19 240 aaPredicted RBP26.99■■□□□ 1.91
USP42-202ENST00000404008 RCN3Q96D15 328 aa26.99■■□□□ 1.91
USP42-202ENST00000404008 COL21A1Q96P44 957 aa26.99■■□□□ 1.91
USP42-202ENST00000404008 ADOQ96SZ5 270 aa26.99■■□□□ 1.91
USP42-202ENST00000404008 CGREF1Q99674 301 aa26.99■■□□□ 1.91
USP42-202ENST00000404008 MRTO4Q9UKD2 239 aaKnown RBP26.99■■□□□ 1.91
USP42-202ENST00000404008 ABCB7O75027 752 aa26.98■■□□□ 1.91
USP42-202ENST00000404008 UGT2B11O75310 529 aa26.98■■□□□ 1.91
USP42-202ENST00000404008 IL33O95760 270 aa26.98■■□□□ 1.91
USP42-202ENST00000404008 NPPAP01160 153 aa26.98■■□□□ 1.91
USP42-202ENST00000404008 IGKV1D-16P01601 117 aa26.98■■□□□ 1.91
USP42-202ENST00000404008 OR12D1P0DN82 309 aa26.98■■□□□ 1.91
USP42-202ENST00000404008 CD46P15529 392 aa26.98■■□□□ 1.91
USP42-202ENST00000404008 IL12BP29460 328 aa26.98■■□□□ 1.91
USP42-202ENST00000404008 PNLIPRP2P54317 469 aa26.98■■□□□ 1.91
USP42-202ENST00000404008 ZNF169Q14929 603 aaPredicted RBP26.98■■□□□ 1.91
USP42-202ENST00000404008 RUNDC3AQ59EK9 446 aa26.98■■□□□ 1.91
USP42-202ENST00000404008 SLC6A19Q695T7 634 aa26.98■■□□□ 1.91
USP42-202ENST00000404008 NUP54Q7Z3B4 507 aa26.98■■□□□ 1.91
USP42-202ENST00000404008 TMEM125Q96AQ2 219 aa26.98■■□□□ 1.91
USP42-202ENST00000404008 SCMH1Q96GD3 660 aa26.98■■□□□ 1.91
USP42-202ENST00000404008 TIMMDC1Q9NPL8 285 aa26.98■■□□□ 1.91
USP42-202ENST00000404008 CHCHD2Q9Y6H1 151 aaPredicted RBP26.98■■□□□ 1.91
USP42-202ENST00000404008 SMG1Q96Q15 3661 aaKnown RBP26.98■■□□□ 1.91
USP42-202ENST00000404008 HMGN4O00479 90 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 AGR2O95994 175 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 SP1P08047 785 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 PPIBP23284 216 aaKnown RBP26.97■■□□□ 1.91
USP42-202ENST00000404008 ANXA11P50995 505 aaKnown RBP26.97■■□□□ 1.91
USP42-202ENST00000404008 ZNF766Q5HY98 468 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 DESI1Q6ICB0 168 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 PSD4Q8NDX1 1056 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 PAQR8Q8TEZ7 354 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 RAB8BQ92930 207 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 HGDQ93099 445 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 PNPLA2Q96AD5 504 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 C5orf34Q96MH7 638 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms