RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 LAMP1P11279 417 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 UQCRC2P22695 453 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 PCSK6P29122 969 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 TIA1P31483 386 aaKnown RBP eCLIP8.43□□□□□ -1.06
PTPRM-202ENST00000400053 MTNR1AP48039 350 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 GSTM4Q03013 218 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 GPR157Q5UAW9 335 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 TRNP1Q6NT89 227 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 CNIH2Q6PI25 160 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 TMPRSS9Q7Z410 1059 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 Q8N9G6 341 aaPredicted RBP8.43□□□□□ -1.06
PTPRM-202ENST00000400053 OR5L2Q8NGL0 311 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 OR6Q1Q8NGQ2 317 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 FANK1Q8TC84 345 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 OR5P2Q8WZ92 322 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 DAZLQ92904 295 aaKnown RBP8.43□□□□□ -1.06
PTPRM-202ENST00000400053 GLYATL1Q969I3 302 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 ZNF578Q96N58 590 aaPredicted RBP8.43□□□□□ -1.06
PTPRM-202ENST00000400053 IGSF5Q9NSI5 407 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 KNL1Q8NG31 2342 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 MARF1Q9Y4F3 1742 aaKnown RBP8.43□□□□□ -1.06
PTPRM-202ENST00000400053 BRWD1Q9NSI6 2320 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 A0A1W2PQ09 198 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 C1orf196B1AJZ1 125 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 PEX14O75381 377 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 PAK4O96013 591 aaPredicted RBP8.43□□□□□ -1.06
PTPRM-202ENST00000400053 OR8U9P0C7N5 309 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 GPX3P22352 226 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 PITPNBP48739 271 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 RGS6P49758 472 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 AKR1C2P52895 323 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 RPP30P78346 268 aaKnown RBP8.43□□□□□ -1.06
PTPRM-202ENST00000400053 SMN1Q16637 294 aaKnown RBP8.43□□□□□ -1.06
PTPRM-202ENST00000400053 ITPRIPL2Q3MIP1 535 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 AKR1C8PQ5T2L2 129 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 VASH1Q7L8A9 365 aaPredicted RBP8.43□□□□□ -1.06
PTPRM-202ENST00000400053 NRROSQ86YC3 692 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 RCBTB1Q8NDN9 531 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 NANOS1Q8WY41 292 aaKnown RBP8.43□□□□□ -1.06
PTPRM-202ENST00000400053 FUBP1Q96AE4 644 aaKnown RBP8.43□□□□□ -1.06
PTPRM-202ENST00000400053 PTERQ96BW5 349 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 ZDHHC12Q96GR4 267 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 TGM7Q96PF1 710 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 BCL7BQ9BQE9 202 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 SULT4A1Q9BR01 284 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 INPP5KQ9BT40 448 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 KCNK12Q9HB15 430 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 GMPR2Q9P2T1 348 aaKnown RBP8.43□□□□□ -1.06
PTPRM-202ENST00000400053 DOCK2Q92608 1830 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 A0A1W2PPL8 197 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 A6NIN4 97 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 AQP9O43315 295 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 LATO43561 262 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 PAHP00439 452 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 HEXBP07686 556 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 CRHBPP24387 322 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 CAMLGP49069 296 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 RAB4BP61018 213 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 TDGQ13569 410 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 DOC2AQ14183 400 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 FAM180BQ6P0A1 224 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 C1orf94Q6P1W5 598 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 FAM198BQ6UWH4 519 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 LIX1LQ8IVB5 337 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 ZNF808Q8N4W9 903 aaPredicted RBP8.43□□□□□ -1.06
PTPRM-202ENST00000400053 TEX26Q8N6G2 289 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 OR9A1PQ8NGU1 263 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 RHOXF1Q8NHV9 184 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 HMGB4Q8WW32 186 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 RBCK1Q9BYM8 510 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.43□□□□□ -1.06
PTPRM-202ENST00000400053 FZD3Q9NPG1 666 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 RLIMQ9NVW2 624 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 SDHAF2Q9NX18 166 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 TP53TG5Q9Y2B4 290 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 BOLA1Q9Y3E2 137 aa8.43□□□□□ -1.06
PTPRM-202ENST00000400053 TRBV2A0A0J9YWF9 115 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 EFCAB7A8K855 629 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 ZNF850A8MQ14 1090 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 RTCAO00442 366 aaKnown RBP8.42□□□□□ -1.06
PTPRM-202ENST00000400053 B4GALT2O60909 372 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 IFNA17P01571 189 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 ADH5P11766 374 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 PGCP20142 388 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 PRDX3P30048 256 aaKnown RBP8.42□□□□□ -1.06
PTPRM-202ENST00000400053 CPOXP36551 454 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 POLR2IP36954 125 aaKnown RBP8.42□□□□□ -1.06
PTPRM-202ENST00000400053 ALDH3B1P43353 468 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 IDH3GP51553 393 aaPredicted RBP8.42□□□□□ -1.06
PTPRM-202ENST00000400053 MFSD13AQ14CX5 517 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 PPA1Q15181 289 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 ZNF529Q6P280 563 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 OR4K5Q8NGD3 323 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 OR8K5Q8NH50 307 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 CAPNS2Q96L46 248 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 C3orf30Q96M34 536 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 DEFB126Q9BYW3 111 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 MKRN2Q9H000 416 aaKnown RBP8.42□□□□□ -1.06
PTPRM-202ENST00000400053 SUSD2Q9UGT4 822 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 GMEB2Q9UKD1 530 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms