RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 NINQ8N4C6 2090 aa16.57■□□□□ 0.24
HLA-DQB1-204ENST00000399084 OR5K3A6NET4 321 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 AGAP5A6NIR3 686 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 FAM227AF5H4B4 570 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 CYR61O00622 381 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SRPX2O60687 465 aaPredicted RBP16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 STX11O75558 287 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ENDOUP21128 410 aaKnown RBP16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 GADD45AP24522 165 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 FPR3P25089 353 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 RGS8P57771 180 aaPredicted RBP16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 EIF2B5Q13144 721 aaKnown RBP16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 C6orf132Q5T0Z8 1188 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ZNF730Q6ZMV8 503 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 TAF8Q7Z7C8 310 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 TDHQ8IZJ6 230 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 RNF113BQ8IZP6 322 aaKnown RBP16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 NLGN4XQ8N0W4 816 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SLC22A18ASQ8N1D0 253 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 TCEANCQ8N8B7 351 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 MCFD2Q8NI22 146 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 WDR36Q8NI36 951 aaKnown RBP16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ADAMTS18Q8TE60 1221 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SDF2Q99470 211 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ZNF350Q9GZX5 532 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 PCED1AQ9H1Q7 454 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 C6orf106Q9H6K1 298 aaPredicted RBP16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SEC14L4Q9UDX3 406 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 CFL2Q9Y281 166 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ZNF443Q9Y2A4 671 aaPredicted RBP16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 MTCH2Q9Y6C9 303 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 LOC105369274A0A096LPK9 316 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 LOC102723532A0A0G2JNH3 316 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 A0A1W2PPC4 97 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SAGE2PA6NJ88 616 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SOX14O95416 240 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 THEGLP0DJG4 465 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 DBTP11182 482 aaKnown RBP16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 RPS4Y1P22090 263 aaKnown RBP16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SOX6P35712 828 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 LSM3P62310 102 aaKnown RBP16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SIM1P81133 766 aaPredicted RBP16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 LTB4RQ15722 352 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 DCDC5Q6ZRR9 648 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 IGFN1Q86VF2 1251 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 RANBP3LQ86VV4 465 aaPredicted RBP16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 OR4N4Q8N0Y3 316 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ZNF619Q8N2I2 560 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 CSNK1A1LQ8N752 337 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 OR9Q1Q8NGQ5 310 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ZCCHC10Q8TBK6 192 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SLC37A2Q8TED4 501 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 COL26A1Q96A83 441 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 KLHDC7BQ96G42 594 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 TOE1Q96GM8 510 aaKnown RBP16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 TAPBPLQ9BX59 468 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ISYNA1Q9NPH2 558 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 CD93Q9NPY3 652 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 TVP23BQ9NYZ1 205 aa16.56■□□□□ 0.24
HLA-DQB1-204ENST00000399084 HYKKA2RU49 373 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 PDX1P52945 283 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 PPP5CP53041 499 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 RAB38P57729 211 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ZNF91Q05481 1191 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 RAB40BQ12829 278 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 FZD2Q14332 565 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SPHARQ15513 63 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 MED22Q15528 200 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 TCEA2Q15560 299 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 C3orf38Q5JPI3 329 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 TYW3Q6IPR3 259 aaKnown RBP16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 FAM111BQ6SJ93 734 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 MBOAT2Q6ZWT7 520 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 PARGQ86W56 976 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 VRK2Q86Y07 508 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 NANOGP1Q8N7R0 232 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 DRAXINQ8NBI3 349 aaPredicted RBP16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 TMEM163Q8TC26 289 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SLC9A6Q92581 669 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 HOXB13Q92826 284 aaPredicted RBP16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 RPL3LQ92901 407 aaKnown RBP16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 CDS1Q92903 461 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 RFKQ969G6 155 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 MCHR1Q99705 422 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 IL20Q9NYY1 176 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 POMT2Q9UKY4 750 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 CORINQ9Y5Q5 1042 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 PMF1-BGLAPU3KQ54 211 aa16.55■□□□□ 0.24
HLA-DQB1-204ENST00000399084 A0A1W2PS29 197 aa16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 METTL15A6NJ78 407 aa16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SHISA7A6NL88 538 aa16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 FAM170BA6NMN3 283 aa16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 PRODHO43272 600 aa16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 TLX2O43763 284 aaPredicted RBP16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 FCMRO60667 390 aa16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 COQ9O75208 318 aa16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 HMGN1P05114 100 aa16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SLC35E2P0CK97 266 aa16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 MAP3K8P41279 467 aa16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ZNF45Q02386 682 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms