RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 BMFQ96LC9 184 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 CST11Q9H112 138 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 HCN2Q9UL51 889 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 ABCG2Q9UNQ0 655 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 GPR52Q9Y2T5 361 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 LRRN3E7EW58 273 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 PLD2O14939 933 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 NDUFB2O95178 105 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 C1orf189Q5VU69 101 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 CCDC80Q76M96 950 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 OR2T4Q8NH00 348 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 SAMD8Q96LT4 415 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 CNN2Q99439 309 aaKnown RBP13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 FUZQ9BT04 418 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 LRRN3Q9H3W5 708 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 STOML2Q9UJZ1 356 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 WRBO00258 174 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 FRS3O43559 492 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 PRKYO43930 277 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 ALPLP05186 524 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 ACY1Q03154 408 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 TUBB3Q13509 450 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 UGT8Q16880 541 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 C4orf46Q504U0 113 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 GPAT4Q86UL3 456 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 LNX2Q8N448 690 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 CEP76Q8TAP6 659 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 SLC22A8Q8TCC7 542 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 CNIH4Q9P003 139 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 CCDC59Q9P031 241 aaKnown RBP13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 KLHL21Q9UJP4 597 aa13.43□□□□□ -0.26
PCDHGA11-201ENST00000398587 PAPPA2Q9BXP8 1791 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 TRBV2A0A0J9YWF9 115 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 C7orf72A4D263 438 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 FOXD2O60548 495 aaPredicted RBP13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 YES1P07947 543 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 NUDT7P0C024 238 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 COL9A2Q14055 689 aaPredicted RBP13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 GLT8D1Q68CQ7 371 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 PLAG1Q6DJT9 500 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 BORAQ6PGQ7 559 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 ZNF740Q8NDX6 193 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 CHDHQ8NE62 594 aaPredicted RBP13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 OR5T3Q8NGG3 340 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 ACOT11Q8WXI4 607 aaPredicted RBP13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 GMPR2Q9P2T1 348 aaKnown RBP13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 PFDN2Q9UHV9 154 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 USP22Q9UPT9 525 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 BCAS1O75363 584 aaPredicted RBP13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 SPRED1Q7Z699 444 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 OR4K13Q8NH42 304 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 CHIAQ9BZP6 476 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 RXFP3Q9NSD7 469 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 ASIC5Q9NY37 505 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 ABCD2Q9UBJ2 740 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 CD300AQ9UGN4 299 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 A0A0X1KG70 313 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 H3BMQ9 156 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 GPR75O95800 540 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 PFN3P60673 137 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 TMEM240Q5SV17 173 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 MAMDC2Q7Z304 686 aaPredicted RBP13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 ARMC10Q8N2F6 343 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 HORMAD2Q8N7B1 307 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 ABHD11Q8NFV4 315 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 FNDC8Q8TC99 324 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 COG8Q96MW5 612 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 HHIPQ96QV1 700 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 PHOX2BQ99453 314 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 ACOT13Q9NPJ3 140 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 NUMBLQ9Y6R0 609 aa13.42□□□□□ -0.26
PCDHGA11-201ENST00000398587 OR6C70A6NIJ9 312 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 SLC9B1P1A6NJY1 282 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 SGK494L7N484 410 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 B4GALT3O60512 393 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 CSTBP04080 98 aaKnown RBP13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 HBQ1P09105 142 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 ACVR1BP36896 505 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 BMXP51813 675 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 SYPL1Q16563 259 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 ALG1LQ6GMV1 187 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 PAQR7Q86WK9 346 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 CPOQ8IVL8 374 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 TMEM239Q8WW34 195 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 CITED4Q96RK1 184 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 HDHD5Q9BXW7 423 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 MS4A8Q9BY19 250 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 MCCC2Q9HCC0 563 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 SLC7A7Q9UM01 511 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 NAALAD2Q9Y3Q0 740 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 H3BSH0 61 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 I6L893 689 aaPredicted RBP13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 PLOD2O00469 737 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 B4GAT1O43505 415 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 CSF2P04141 144 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 FURINP09958 794 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 PVRP15151 417 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 PPP5CP53041 499 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 MAB21L1Q13394 359 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 APOFQ13790 326 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms