RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 PIN1Q13526 163 aaPredicted RBP15.05■□□□□ -0
CHMP1A-201ENST00000397901 P2RY14Q15391 338 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 ZNF57Q68EA5 555 aaPredicted RBP15.05■□□□□ -0
CHMP1A-201ENST00000397901 NXPE4Q6UWF7 544 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 OVCH2Q7RTZ1 564 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 PDZD3Q86UT5 571 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 MS4A15Q8N5U1 240 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 SYT14Q8NB59 555 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 OR52I1Q8NGK6 324 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 TMEM163Q8TC26 289 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 SLC7A13Q8TCU3 470 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 NXPE2Q96DL1 559 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 SIPA1Q96FS4 1042 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 KCTD7Q96MP8 289 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 IL17FQ96PD4 163 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 PRR14Q9BWN1 585 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 REG4Q9BYZ8 158 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.05■□□□□ -0
CHMP1A-201ENST00000397901 SDHAF2Q9NX18 166 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 KCMF1Q9P0J7 381 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 PLAGL1Q9UM63 463 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 COPS3Q9UNS2 423 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 NOSIPQ9Y314 301 aaKnown RBP15.05■□□□□ -0
CHMP1A-201ENST00000397901 PLXND1Q9Y4D7 1925 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 HMGN1P05114 100 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 CLTBP09497 229 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 MANFP55145 182 aaKnown RBP15.04■□□□□ -0
CHMP1A-201ENST00000397901 CAV3P56539 151 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 GPR85P60893 370 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 ERVK-21P61565 698 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 LSM11P83369 360 aaKnown RBP eCLIP15.04■□□□□ -0
CHMP1A-201ENST00000397901 FLI1Q01543 452 aaPredicted RBP15.04■□□□□ -0
CHMP1A-201ENST00000397901 TAP2Q03519 686 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 DUSP6Q16828 381 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 SPDYE7PQ495Y7 208 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 OLIG3Q7RTU3 272 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 SZRD1Q7Z422 152 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 TRAPPC5Q8IUR0 188 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 KCT2Q8NC54 265 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 ST8SIA2Q92186 375 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 HGDQ93099 445 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 COMMD3Q9UBI1 195 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 MALT1Q9UDY8 824 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 NDOR1Q9UHB4 597 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 HCN2Q9UL51 889 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 C7orf66A4D0T2 115 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 MFSD2BA6NFX1 497 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 ANHXE9PGG2 379 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 TGM5O43548 720 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 AKAP8O43823 692 aaKnown RBP15.04■□□□□ -0
CHMP1A-201ENST00000397901 CTSLP07711 333 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 HSD17B12Q53GQ0 312 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 OR2G6Q5TZ20 316 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 CD276Q5ZPR3 534 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 LRFN4Q6PJG9 635 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 UNC5DQ6UXZ4 953 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 CHMP1BQ7LBR1 199 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 TRMT11Q7Z4G4 463 aaKnown RBP15.04■□□□□ -0
CHMP1A-201ENST00000397901 MEX3DQ86XN8 651 aaKnown RBP15.04■□□□□ -0
CHMP1A-201ENST00000397901 SLC30A8Q8IWU4 369 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 ADGRF3Q8IZF5 1079 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 KATNB1Q9BVA0 655 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 SGPP1Q9BX95 441 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 SLC46A2Q9BY10 475 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.04■□□□□ -0
CHMP1A-201ENST00000397901 FANCFQ9NPI8 374 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 SLCO1C1Q9NYB5 712 aa15.04■□□□□ -0
CHMP1A-201ENST00000397901 M0R3H8 397 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 B4GALT2O60909 372 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 NME6O75414 186 aaPredicted RBP15.03■□□□□ -0
CHMP1A-201ENST00000397901 PAHP00439 452 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 CFDP00746 253 aaPredicted RBP15.03■□□□□ -0
CHMP1A-201ENST00000397901 ELFN1P0C7U0 828 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 FOSL1P15407 271 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 SLC6A1P30531 599 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 SSTR2P30874 369 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 ATP12AP54707 1039 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 RPS25P62851 125 aaKnown RBP15.03■□□□□ -0
CHMP1A-201ENST00000397901 GRIN2CQ14957 1233 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 PM20D2Q8IYS1 436 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 DNAJC5GQ8N7S2 189 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 OR9A1PQ8NGU1 263 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 NEURL3Q96EH8 262 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 C1GALT1C1Q96EU7 318 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 WDR34Q96EX3 536 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 LRR1Q96L50 414 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 NRTNQ99748 197 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 FAM83CQ9BQN1 747 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 ZBP1Q9H171 429 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 CTPS2Q9NRF8 586 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 SEC14L3Q9UDX4 400 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 ASB4Q9Y574 426 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 PLXNA2O75051 1894 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 PTPRSQ13332 1948 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 EVX1P49640 407 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 ZNF169Q14929 603 aaPredicted RBP15.03■□□□□ -0
CHMP1A-201ENST00000397901 SYT14P1Q58G82 188 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 BCL2L15Q5TBC7 163 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 TMEM215Q68D42 235 aa15.03■□□□□ -0
CHMP1A-201ENST00000397901 BHLHB9Q6PI77 547 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms