RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 NCLNQ969V3 563 aa15.7■□□□□ 0.1
TSPAN4-205ENST00000397406 TMEM19Q96HH6 336 aa15.7■□□□□ 0.1
TSPAN4-205ENST00000397406 LPAR4Q99677 370 aa15.7■□□□□ 0.1
TSPAN4-205ENST00000397406 PRODH2Q9UF12 536 aa15.7■□□□□ 0.1
TSPAN4-205ENST00000397406 BSNQ9UPA5 3926 aa15.7■□□□□ 0.1
TSPAN4-205ENST00000397406 TCRBV5S2A0A599 114 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 TCRBV3S1A0A5B6 114 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 AQP12BA6NM10 295 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 EIF4E1BA6NMX2 242 aaKnown RBP15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 SOCS6O14544 535 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 STAMBPO95630 424 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 AGR2O95994 175 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 COX6A1P12074 109 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 PCBP3P57721 371 aaKnown RBP15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 SLC26A5P58743 744 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 C19orf57Q0VDD7 668 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 SSPNQ14714 243 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 REEP3Q6NUK4 255 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 NPSR1Q6W5P4 371 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 CCDC80Q76M96 950 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 PPP1R32Q7Z5V6 425 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 SLC44A2Q8IWA5 706 aaPredicted RBP15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 SLC30A8Q8IWU4 369 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 AQP12AQ8IXF9 295 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 ANKFN1Q8N957 763 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 ZSCAN1Q8NBB4 408 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 APCDD1LQ8NCL9 501 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 EXTL1Q92935 676 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 LRGUKQ96M69 825 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 NSMCE2Q96MF7 247 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 ITPAQ9BY32 194 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 TRIM15Q9C019 465 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 ZNF700Q9H0M5 742 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 RUBCNLQ9H714 662 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 COPS7AQ9UBW8 275 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 ZNF223Q9UK11 482 aaPredicted RBP15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 ANGPT4Q9Y264 503 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 CFL2Q9Y281 166 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 ZNF451Q9Y4E5 1061 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 PCDHGA6Q9Y5G7 932 aa15.69■□□□□ 0.1
TSPAN4-205ENST00000397406 IGHV1-45A0A0A0MS14 117 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 TTC36A6NLP5 189 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 OR6C76A6NM76 312 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 A8MVJ9 347 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 SLC28A2O43868 658 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 GMNNO75496 209 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 SOX30O94993 753 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 C8BP07358 591 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 CHRM4P08173 479 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 CT45A8P0DMV1 189 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 CT45A9P0DMV2 189 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 KDELR2P33947 212 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 GABRA3P34903 492 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 CRYBA2P53672 197 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 EBPQ15125 230 aaKnown RBP15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 ZNHIT3Q15649 155 aaPredicted RBP15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 ARHGAP11BQ3KRB8 267 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 CT45A2Q5DJT8 189 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 MTX3Q5HYI7 312 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 ATAD3BQ5T9A4 648 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 INTS11Q5TA45 600 aaKnown RBP15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 KIRREL2Q6UWL6 708 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 SPATA24Q86W54 205 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 C9orf40Q8IXQ3 194 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 CHDHQ8NE62 594 aaPredicted RBP15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 OR11G2Q8NGC1 345 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 PIK3R3Q92569 461 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 BTBD9Q96Q07 612 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 EXD2Q9NVH0 621 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 LIPT1Q9Y234 373 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 GCN1Q92616 2671 aaKnown RBP15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 ZNF462Q96JM2 2506 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 EXPH5Q8NEV8 1989 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 GXYLT2A0PJZ3 443 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 TMEM247A6NEH6 219 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 PGM3O95394 542 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 NR2F1P10589 423 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 LIFP15018 202 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 AQP1P29972 269 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 CLCN2P51788 898 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 RPS26P11Q5JNZ5 115 aaPredicted RBP15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 OLIG3Q7RTU3 272 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 C16orf62Q7Z3J2 963 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 GALNT10Q86SR1 603 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 IL22RA1Q8N6P7 574 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 GPR151Q8TDV0 419 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 FAM162AQ96A26 154 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 ADIPOR1Q96A54 375 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 NACC2Q96BF6 587 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 VMP1Q96GC9 406 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 IMMP1LQ96LU5 166 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 TRNT1Q96Q11 434 aaKnown RBP15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 TREX2Q9BQ50 279 aaPredicted RBP15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 BTBD2Q9BX70 525 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 BCL2L10Q9HD36 194 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 DCAF13Q9NV06 445 aaKnown RBP15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 KCND3Q9UK17 655 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 GPR55Q9Y2T6 319 aaPredicted RBP15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 PCDHGB3Q9Y5G1 929 aa15.68■□□□□ 0.1
TSPAN4-205ENST00000397406 MRPS18BQ9Y676 258 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms