RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 OPN5Q6U736 354 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 RASGRP3Q8IV61 690 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 OR10H5Q8NGA6 315 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 OR4K5Q8NGD3 323 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 NFKBIDQ8NI38 313 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 IFT27Q9BW83 186 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 CASKO14936 926 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 CYB5AP00167 134 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 PNLIPP16233 465 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 FMO3P31513 532 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 MAGEA2P43356 314 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 PITPNAQ00169 270 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 SPHARQ15513 63 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 FXNQ16595 210 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 TTLL10Q6ZVT0 673 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 OR7G1Q8NGA0 311 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ELP4Q96EB1 424 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 MRGPRX3Q96LB0 322 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 C5orf34Q96MH7 638 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 TUBB1Q9H4B7 451 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 A4GALTQ9NPC4 353 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 COQ6Q9Y2Z9 468 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 SLC9B1P1A6NJY1 282 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 PLOD2O00469 737 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 GBAP04062 536 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 CEACAM5P06731 702 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ITGAMP11215 1152 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ETFAP13804 333 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 NCK1P16333 377 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 CD72P21854 359 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 BCAP31P51572 246 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 MS4A2Q01362 244 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 E2F2Q14209 437 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 KLHL24Q6TFL4 600 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 KCTD8Q6ZWB6 473 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 TOR3AQ9H497 397 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 KLK4Q9Y5K2 254 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 GMEB1Q9Y692 573 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 DPPA5A6NC42 116 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 METTL21EPA6NDL7 271 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 TMEM202A6NGA9 273 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 HSPB2A8KAH6 182 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 PDCD5O14737 125 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 HCRTR2O43614 444 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 SMNDC1O75940 238 aaKnown RBP eCLIP3.19□□□□□ -1.91e-7■□□□□ 9.2
VPS13C-203ENST00000395896 TYRP1P17643 537 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 FBLP22087 321 aaKnown RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 IGFBP6P24592 240 aaPredicted RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 MSX1P28360 303 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 HOXA6P31267 233 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 SLC19A1P41440 591 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 RAB38P57729 211 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 PDE7AQ13946 482 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 CCDC85BQ15834 202 aaPredicted RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 HSPB2Q16082 182 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 EXT1Q16394 746 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 OR5AK3PQ8NH89 298 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF671Q8TAW3 534 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF675Q8TD23 568 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 OR8D2Q9GZM6 311 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 PLEKHA1Q9HB21 404 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 MEPEQ9NQ76 525 aaPredicted RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 A0A1B0GX78 115 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 GRXCR1A8MXD5 290 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 TAPBPO15533 448 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 BRINP1O60477 761 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 GALR3O60755 368 aaPredicted RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 CLPXO76031 633 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ZFAND5O76080 213 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 GP1BBP13224 206 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ACSL1P33121 698 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 OPRD1P41143 372 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 XCR1P46094 333 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 HTR6P50406 440 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 C16orf72Q14CZ0 275 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 CCDC103Q8IW40 242 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 GALNT6Q8NCL4 622 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ADAMTS19Q8TE59 1207 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 FGF21Q9NSA1 209 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ZFR2Q9UPR6 939 aaKnown RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF106Q9H2Y7 1883 aaKnown RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 C2orf92A0A1B0GVN3 265 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 CDK2AP1O14519 115 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 VAMP5O95183 116 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 FARS2O95363 451 aaKnown RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 DHFRP00374 187 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 HLA-DQA2P01906 255 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 PRKAR1AP10644 381 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 SLC6A11P48066 632 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 RORCP51449 518 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 RRADP55042 308 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ST3GAL4Q11206 333 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 MICAQ29983 383 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 DLEU7Q6UYE1 221 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 CHRDL2Q6WN34 429 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ABI3BPQ7Z7G0 1075 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ADAMTS16Q8TE57 1224 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ACOT12Q8WYK0 555 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 TRIM63Q969Q1 353 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 GFM1Q96RP9 751 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms