RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 WDR45Q9Y484 360 aa18.95■□□□□ 0.62
VCPKMT-202ENST00000395860 GABREP78334 506 aa18.94■□□□□ 0.62
VCPKMT-202ENST00000395860 NPSR1Q6W5P4 371 aa18.94■□□□□ 0.62
VCPKMT-202ENST00000395860 C8orf44Q96CB5 159 aa18.94■□□□□ 0.62
VCPKMT-202ENST00000395860 RMND5BQ96G75 393 aaPredicted RBP18.94■□□□□ 0.62
VCPKMT-202ENST00000395860 POLR1BQ9H9Y6 1135 aa18.94■□□□□ 0.62
VCPKMT-202ENST00000395860 MKLN1Q9UL63 735 aa18.94■□□□□ 0.62
VCPKMT-202ENST00000395860 TMEM229AB2RXF0 380 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 FCMRO60667 390 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 STX11O75558 287 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 UMODP07911 640 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 RAB40ALP0C0E4 278 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 CT45A8P0DMV1 189 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 CT45A9P0DMV2 189 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 PTDSS1P48651 473 aaKnown RBP18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 KCNJ10P78508 379 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 NNATQ16517 81 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 CT45A2Q5DJT8 189 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 TYW3Q6IPR3 259 aaKnown RBP18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 FIGNL1Q6PIW4 674 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 FRRS1Q6ZNA5 592 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 AMIGO2Q86SJ2 522 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 B3GNT7Q8NFL0 401 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 ZNF350Q9GZX5 532 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 SEMA6AQ9H2E6 1030 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 OR10H1Q9Y4A9 318 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 DSPPQ9NZW4 1301 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 SEC24DO94855 1032 aaPredicted RBP18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 KCNK2O95069 426 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 SEMG1P04279 462 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 ALPPP05187 535 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 TRHRP34981 398 aaPredicted RBP18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 DUSP7Q16829 419 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 IFI44LQ53G44 452 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 HLA-DQA1Q5Y7H0 255 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 HMBOX1Q6NT76 420 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 SLC29A4Q7RTT9 530 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 ZDHHC21Q8IVQ6 265 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 NLGN4XQ8N0W4 816 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 TMEM102Q8N9M5 508 aaPredicted RBP18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 NLGN4YQ8NFZ3 816 aaPredicted RBP18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 OR4N2Q8NGD1 307 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 SPPL2AQ8TCT8 520 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 BTBD9Q96Q07 612 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 GAL3ST4Q96RP7 486 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 QRSL1Q9H0R6 528 aaKnown RBP18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 CACYBPQ9HB71 228 aaKnown RBP18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 AGPAT4Q9NRZ5 378 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 BAG5Q9UL15 447 aa18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 GPR55Q9Y2T6 319 aaPredicted RBP18.93■□□□□ 0.62
VCPKMT-202ENST00000395860 C2orf92A0A1B0GVN3 265 aa18.92■□□□□ 0.62
VCPKMT-202ENST00000395860 OR6C76A6NM76 312 aa18.92■□□□□ 0.62
VCPKMT-202ENST00000395860 ZIC2O95409 532 aaPredicted RBP18.92■□□□□ 0.62
VCPKMT-202ENST00000395860 IGHEP01854 428 aa18.92■□□□□ 0.62
VCPKMT-202ENST00000395860 FABP3P05413 133 aa18.92■□□□□ 0.62
VCPKMT-202ENST00000395860 CD247P20963 164 aa18.92■□□□□ 0.62
VCPKMT-202ENST00000395860 PPICP45877 212 aa18.92■□□□□ 0.62
VCPKMT-202ENST00000395860 RFX3P48380 749 aa18.92■□□□□ 0.62
VCPKMT-202ENST00000395860 GPR143P51810 404 aa18.92■□□□□ 0.62
VCPKMT-202ENST00000395860 TRIP10Q15642 601 aa18.92■□□□□ 0.62
VCPKMT-202ENST00000395860 GPR68Q15743 365 aa18.92■□□□□ 0.62
VCPKMT-202ENST00000395860 CYP27C1Q4G0S4 372 aa18.92■□□□□ 0.62
VCPKMT-202ENST00000395860 HMGN2P46Q86SG4 172 aa18.92■□□□□ 0.62
VCPKMT-202ENST00000395860 C9orf40Q8IXQ3 194 aa18.92■□□□□ 0.62
VCPKMT-202ENST00000395860 NFAM1Q8NET5 270 aaPredicted RBP18.92■□□□□ 0.62
VCPKMT-202ENST00000395860 NRG4Q8WWG1 115 aa18.92■□□□□ 0.62
VCPKMT-202ENST00000395860 WDR77Q9BQA1 342 aaPredicted RBP18.92■□□□□ 0.62
VCPKMT-202ENST00000395860 TRIM45Q9H8W5 580 aaPredicted RBP18.92■□□□□ 0.62
VCPKMT-202ENST00000395860 MTHFD2LQ9H903 347 aaPredicted RBP18.92■□□□□ 0.62
VCPKMT-202ENST00000395860 IL1RAPQ9NPH3 570 aa18.92■□□□□ 0.62
VCPKMT-202ENST00000395860 CBLCQ9ULV8 474 aa18.92■□□□□ 0.62
VCPKMT-202ENST00000395860 RIF1Q5UIP0 2472 aaKnown RBP18.92■□□□□ 0.62
VCPKMT-202ENST00000395860 KNTC1P50748 2209 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 LOC102723996A0A087X1L8 192 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 PCDH17O14917 1159 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 FESP07332 822 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 RBMS1P29558 406 aaKnown RBP18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 KCNJ5P48544 419 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 DCAF7P61962 342 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 RPS15P62841 145 aaKnown RBP18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 EBPQ15125 230 aaKnown RBP18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 ZNF619Q8N2I2 560 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 PROX1Q92786 737 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 ADIPOR1Q96A54 375 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 LCORQ96JN0 433 aaPredicted RBP18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 POLE3Q9NRF9 147 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 FBXO34Q9NWN3 711 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 TCFL5Q9UL49 500 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 PPIEQ9UNP9 301 aaKnown RBP18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 FARSAQ9Y285 508 aaKnown RBP18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 SH3GLB1Q9Y371 365 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 STMND1H3BQB6 276 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 hCG_2039718K7EN88 272 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 RAD1O60671 282 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 DEAF1O75398 565 aaPredicted RBP18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 CST1P01037 141 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 LDLRP01130 860 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 PABPC4LP0CB38 370 aaKnown RBP18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 TNFRSF1BP20333 461 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 ATP6V1C1P21283 382 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms