RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 A0A1W2PPK0 400 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 TMEM150CB9EJG8 249 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 LSSP48449 732 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 GZMMP51124 257 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 PHF19Q5T6S3 580 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 KDM4DQ6B0I6 523 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 NKAIN4Q8IVV8 208 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 FAM98AQ8NCA5 519 aaKnown RBP14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 OR52E4Q8NGH9 312 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 OR51G2Q8NGK0 314 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 OR2A14Q96R47 310 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 GXYLT2A0PJZ3 443 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 GCM2O75603 506 aaPredicted RBP14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 SNX4O95219 450 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 GADD45AP24522 165 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 INAQ16352 499 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 GKN2Q86XP6 184 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 SLC22A18ASQ8N1D0 253 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 ARL14Q8N4G2 192 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 OR4N2Q8NGD1 307 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 SUN3Q8TAQ9 357 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 SMAP2Q8WU79 429 aaPredicted RBP14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 GABRG3Q99928 467 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 ACTRT3Q9BYD9 372 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 TMEM27Q9HBJ8 222 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 UCKL1Q9NWZ5 548 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 A0A0J9YY10 115 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 BLOC1S5-TXNDC5H3BN57 136 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 MFN2O95140 757 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 AHRP35869 848 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 NDUFA9Q16795 377 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 GPR32P1Q8NGA4 272 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 MED20Q9H944 212 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 DAPP1Q9UN19 280 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 GPR55Q9Y2T6 319 aaPredicted RBP14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 PCDHGA6Q9Y5G7 932 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 PROM1O43490 865 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 TBX6O95947 436 aaPredicted RBP14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 AHCYP23526 432 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 ST3GAL3Q11203 375 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 SDR16C5Q8N3Y7 309 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 OR4D11Q8NGI4 311 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 OR6K6Q8NGW6 343 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 GATAD2BQ8WXI9 593 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 TBC1D20Q96BZ9 403 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 SLC25A36Q96CQ1 311 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 SLC35A4Q96G79 324 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 PDE7BQ9NP56 450 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 CCNB1IP1Q9NPC3 277 aa14.89□□□□□ -0.03
SMARCD1-202ENST00000394963 EFCAB10A6NFE3 127 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 PSMD9O00233 223 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 TBX1O43435 398 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 RNASE12Q5GAN4 147 aaKnown RBP14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 ARHGAP40Q5TG30 622 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 GTF2IRD2BQ6EKJ0 949 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 PAQR6Q6TCH4 344 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 GTF2IRD2Q86UP8 949 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 CYP4Z2PQ8N1L4 340 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 METTL2AQ96IZ6 378 aaKnown RBP14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 TTYH1Q9H313 450 aaPredicted RBP14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 IGHV3-20A0A0C4DH32 117 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 OPN1LWP04000 364 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 OCM2P0CE71 109 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 OCMP0CE72 109 aaPredicted RBP14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 PRG2P13727 222 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 GRPRP30550 384 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 DNASE1L3Q13609 305 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 ODF4Q2M2E3 257 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 RANBP3LQ86VV4 465 aaPredicted RBP14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 VWA5B2Q8N398 1253 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 LGALS12Q96DT0 336 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 OR5M11Q96RB7 305 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 TMED9Q9BVK6 235 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 LYARQ9NX58 379 aaKnown RBP14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 CLEC2DQ9UHP7 191 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 MRPS7Q9Y2R9 242 aaKnown RBP14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 CXorf51AA0A1B0GTR3 108 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 PIP5K1CO60331 668 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 PTHP01270 115 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 CDK4P11802 303 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 SERPINB1P30740 379 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 FZD2Q14332 565 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 SMAD2Q15796 467 aaKnown RBP14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 ENTPD8Q5MY95 495 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 PDZK1Q5T2W1 519 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 TMEM255BQ8WV15 326 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 SAMD8Q96LT4 415 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 RDH12Q96NR8 316 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 LRRC61Q9BV99 259 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 SIRT3Q9NTG7 399 aaPredicted RBP14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 ENOPH1Q9UHY7 261 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 ASB4Q9Y574 426 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 FRYLO94915 3013 aa14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 MDC1Q14676 2089 aaKnown RBP14.88□□□□□ -0.03
SMARCD1-202ENST00000394963 TRAV27A0A087WT01 109 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 MBTPS2O43462 519 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 HLA-DQA2P01906 255 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 GCGRP47871 477 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 SKP1P63208 163 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms