RNA–Protein interactions for RNA: ENST00000394800.6

MATR3-230, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-230ENST00000394800 PITPNAQ00169 270 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 CAMK2BQ13554 666 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 NDUFAF5Q5TEU4 345 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 OR7E24Q6IFN5 339 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 LSRQ86X29 649 aaPredicted RBP5.52□□□□□ -1.53
MATR3-230ENST00000394800 DEFB107AQ8IZN7 70 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 OR4D10Q8NGI6 311 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 LPGAT1Q92604 370 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 BCL2L2Q92843 193 aaPredicted RBP5.52□□□□□ -1.53
MATR3-230ENST00000394800 FAM46BQ96A09 425 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 NUDT11Q96G61 164 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 SFXN2Q96NB2 322 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 ZNF599Q96NL3 588 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 BIRC8Q96P09 236 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 DCLRE1CQ96SD1 692 aaKnown RBP5.52□□□□□ -1.53
MATR3-230ENST00000394800 LRRC3Q9BY71 257 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 PCBD2Q9H0N5 130 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 ZCCHC4Q9H5U6 513 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 IL21RQ9HBE5 538 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 DNMT3BQ9UBC3 853 aaKnown RBP5.52□□□□□ -1.53
MATR3-230ENST00000394800 LHX3Q9UBR4 397 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 MGAT4DA6NG13 374 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 TGM5O43548 720 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 TCF21O43680 179 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 MED6O75586 246 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 RPP40O75818 363 aaKnown RBP5.52□□□□□ -1.53
MATR3-230ENST00000394800 NKX2-2O95096 273 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 OTCP00480 354 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 GABRR2P28476 465 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 METAP1P53582 386 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 FOXA1P55317 472 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 YBX1P67809 324 aaKnown RBP5.52□□□□□ -1.53
MATR3-230ENST00000394800 SH3BP2P78314 561 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 POU6F2P78424 691 aaPredicted RBP5.52□□□□□ -1.53
MATR3-230ENST00000394800 PDK3Q15120 406 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 IQCCQ4KMZ1 466 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 OGFRL1Q5TC84 451 aaPredicted RBP5.52□□□□□ -1.53
MATR3-230ENST00000394800 WBP2NLQ6ICG8 309 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 FAM122BQ7Z309 247 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 GLT6D1Q7Z4J2 308 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 ARL14Q8N4G2 192 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 CPEB3Q8NE35 698 aaKnown RBP5.52□□□□□ -1.53
MATR3-230ENST00000394800 OR9I1Q8NGQ6 314 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 UBASH3BQ8TF42 649 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 BTF3L4Q96K17 158 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 CCDC115Q96NT0 180 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 ATOH8Q96SQ7 321 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 GPA33Q99795 319 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 SRRQ9GZT4 340 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.52□□□□□ -1.53
MATR3-230ENST00000394800 CCL26Q9Y258 94 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 HCFC2Q9Y5Z7 792 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 ZFC3H1O60293 1989 aaKnown RBP5.52□□□□□ -1.53
MATR3-230ENST00000394800 PRAMEF33A0A0G2JMD5 474 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 A0A1B0GV90 55 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 A0A1W2PRU2 124 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 PRAMEF10O60809 474 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 ZNF821O75541 412 aaPredicted RBP5.52□□□□□ -1.53
MATR3-230ENST00000394800 FDXRP22570 491 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 FMO4P31512 558 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 CSKP41240 450 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 MRPS10P82664 201 aaKnown RBP5.52□□□□□ -1.53
MATR3-230ENST00000394800 MTAPQ13126 283 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 TRAM1Q15629 374 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 HYAL4Q2M3T9 481 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 ALKBH6Q3KRA9 238 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 PLA1AQ53H76 456 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 SAMD4BQ5PRF9 694 aaKnown RBP5.52□□□□□ -1.53
MATR3-230ENST00000394800 BRICD5Q6PL45 260 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 SERPINA13PQ6UXR4 307 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 DCBLD1Q8N8Z6 715 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 RDH11Q8TC12 318 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 RORBQ92753 470 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 C11orf24Q96F05 449 aaPredicted RBP5.52□□□□□ -1.53
MATR3-230ENST00000394800 C17orf62Q9BQA9 187 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 SRSF8Q9BRL6 282 aaKnown RBP5.52□□□□□ -1.53
MATR3-230ENST00000394800 TUBB6Q9BUF5 446 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 ANGPT4Q9Y264 503 aa5.52□□□□□ -1.53
MATR3-230ENST00000394800 TBC1D3DA0A087WVF3 549 aa5.51□□□□□ -1.53
MATR3-230ENST00000394800 TBC1D3IA0A087WXS9 549 aa5.51□□□□□ -1.53
MATR3-230ENST00000394800 TBC1D3EA0A087X179 549 aa5.51□□□□□ -1.53
MATR3-230ENST00000394800 TBC1D3KA0A087X1G2 549 aa5.51□□□□□ -1.53
MATR3-230ENST00000394800 TBC1D3BA6NDS4 549 aa5.51□□□□□ -1.53
MATR3-230ENST00000394800 TBC1D3FA6NER0 549 aaPredicted RBP5.51□□□□□ -1.53
MATR3-230ENST00000394800 FAM166BA8MTA8 275 aa5.51□□□□□ -1.53
MATR3-230ENST00000394800 TBC1D3LB9A6J9 549 aa5.51□□□□□ -1.53
MATR3-230ENST00000394800 SLC16A6O15403 523 aa5.51□□□□□ -1.53
MATR3-230ENST00000394800 CFLARO15519 480 aa5.51□□□□□ -1.53
MATR3-230ENST00000394800 TSPAN12O95859 305 aa5.51□□□□□ -1.53
MATR3-230ENST00000394800 SCGB1D1O95968 90 aa5.51□□□□□ -1.53
MATR3-230ENST00000394800 FTH1P02794 183 aa5.51□□□□□ -1.53
MATR3-230ENST00000394800 CDK1P06493 297 aa5.51□□□□□ -1.53
MATR3-230ENST00000394800 TBC1D3HP0C7X1 549 aa5.51□□□□□ -1.53
MATR3-230ENST00000394800 CD1DP15813 335 aa5.51□□□□□ -1.53
MATR3-230ENST00000394800 NCK1P16333 377 aa5.51□□□□□ -1.53
MATR3-230ENST00000394800 CKMT2P17540 419 aa5.51□□□□□ -1.53
MATR3-230ENST00000394800 MSH3P20585 1137 aa5.51□□□□□ -1.53
MATR3-230ENST00000394800 PRDX3P30048 256 aaKnown RBP5.51□□□□□ -1.53
MATR3-230ENST00000394800 ATP6AP1Q15904 470 aa5.51□□□□□ -1.53
MATR3-230ENST00000394800 PTPRNQ16849 979 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms