RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 LYVE1Q9Y5Y7 322 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 CLCA3PQ9Y6N3 262 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 DMDP11532 3685 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 NTN3O00634 580 aaPredicted RBP8.04□□□□□ -1.12
TDP1-203ENST00000393454 MITFO75030 526 aaPredicted RBP8.04□□□□□ -1.12
TDP1-203ENST00000393454 ZIC2O95409 532 aaPredicted RBP8.04□□□□□ -1.12
TDP1-203ENST00000393454 LGI1O95970 557 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 IL7RP16871 459 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 EMDP50402 254 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 DAPP51397 102 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 TPD52P55327 224 aaPredicted RBP8.04□□□□□ -1.12
TDP1-203ENST00000393454 OCA2Q04671 838 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 EPS8Q12929 822 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 LARS2Q15031 903 aaKnown RBP8.04□□□□□ -1.12
TDP1-203ENST00000393454 LAPTM4BQ86VI4 370 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 COMTD1Q86VU5 262 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 OFCC1Q8IZS5 231 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 CHDHQ8NE62 594 aaPredicted RBP8.04□□□□□ -1.12
TDP1-203ENST00000393454 APOBEC4Q8WW27 367 aaKnown RBP8.04□□□□□ -1.12
TDP1-203ENST00000393454 ZNF578Q96N58 590 aaPredicted RBP8.04□□□□□ -1.12
TDP1-203ENST00000393454 RDH12Q96NR8 316 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 WFDC6Q9BQY6 131 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 ANKRD60Q9BZ19 345 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 OR10A5Q9H207 317 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 RIBC2Q9H4K1 309 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 FBXO34Q9NWN3 711 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 KLHL28Q9NXS3 571 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 CTSFQ9UBX1 484 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 C3orf18Q9UK00 162 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 IFT52Q9Y366 437 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 GPR179Q6PRD1 2367 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 DSPPQ9NZW4 1301 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 NPIPA5A0A0B4J1W7 369 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 NPIPA7E9PJI5 369 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 PCDH17O14917 1159 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 FRS3O43559 492 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 NKX2-2O95096 273 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 AK1P00568 194 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 HBQ1P09105 142 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 NPIPA8P0DM63 369 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 ACP1P24666 158 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 GALNSP34059 522 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 RNF144AP50876 292 aaPredicted RBP8.03□□□□□ -1.12
TDP1-203ENST00000393454 ADARB1P78563 741 aaKnown RBP8.03□□□□□ -1.12
TDP1-203ENST00000393454 DCDP81605 110 aaKnown RBP8.03□□□□□ -1.12
TDP1-203ENST00000393454 RHAGQ02094 409 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 FUT7Q11130 342 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 TRA2AQ13595 282 aaKnown RBP eCLIP8.03□□□□□ -1.12
TDP1-203ENST00000393454 NNATQ16517 81 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 NKAIN1Q4KMZ8 207 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 FGD3Q5JSP0 725 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 EXOSC6Q5RKV6 272 aaKnown RBP8.03□□□□□ -1.12
TDP1-203ENST00000393454 FAAH2Q6GMR7 532 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 TCTN3Q6NUS6 607 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 ZNF619Q8N2I2 560 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 SLC38A9Q8NBW4 561 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 AGBL5Q8NDL9 886 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 OR10G2Q8NGC3 310 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 C16orf52Q8NHV5 167 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 PTPMT1Q8WUK0 201 aaPredicted RBP8.03□□□□□ -1.12
TDP1-203ENST00000393454 SENP5Q96HI0 755 aaPredicted RBP8.03□□□□□ -1.12
TDP1-203ENST00000393454 MBOAT4Q96T53 435 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 LMF2Q9BU23 707 aaKnown RBP8.03□□□□□ -1.12
TDP1-203ENST00000393454 OR8D2Q9GZM6 311 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 KRT84Q9NSB2 600 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 ACER3Q9NUN7 267 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 FAM118AQ9NWS6 357 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 SIDT1Q9NXL6 827 aaKnown RBP8.03□□□□□ -1.12
TDP1-203ENST00000393454 TMEFF2Q9UIK5 374 aaPredicted RBP8.03□□□□□ -1.12
TDP1-203ENST00000393454 TMCC3Q9ULS5 477 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 SATB2Q9UPW6 733 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 ZNF443Q9Y2A4 671 aaPredicted RBP8.03□□□□□ -1.12
TDP1-203ENST00000393454 DTX4Q9Y2E6 619 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 OR10H1Q9Y4A9 318 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 NUP210LQ5VU65 1888 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 FER1L5A0AVI2 2057 aa8.03□□□□□ -1.12
TDP1-203ENST00000393454 H0YAE9 185 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 SYT5O00445 386 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 FFAR1O14842 300 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 POLR1CO15160 346 aaPredicted RBP8.02□□□□□ -1.12
TDP1-203ENST00000393454 TPST2O60704 377 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 SOX30O94993 753 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 CCNB2O95067 398 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 KCNK2O95069 426 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 EPPINO95925 133 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 H1F0P07305 194 aaKnown RBP8.02□□□□□ -1.12
TDP1-203ENST00000393454 GP1BAP07359 652 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 CYP4B1P13584 511 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 CDH2P19022 906 aaPredicted RBP8.02□□□□□ -1.12
TDP1-203ENST00000393454 MYF6P23409 242 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 PRKAR1BP31321 381 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 MAP3K8P41279 467 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 PSG6Q00889 435 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 KCNAB2Q13303 367 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 PIN1Q13526 163 aaPredicted RBP8.02□□□□□ -1.12
TDP1-203ENST00000393454 BLMHQ13867 455 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 MICAQ29983 383 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 RFX4Q33E94 735 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 FLYWCH1Q4VC44 716 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 COLEC12Q5KU26 742 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms