RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 HERVK_113P63132 956 aa2.17□□□□□ -2.06
RNU6-550P-201ENST00000391057 ERVK-8P63133 956 aa2.17□□□□□ -2.06
RNU6-550P-201ENST00000391057 CAMK4Q16566 473 aa2.17□□□□□ -2.06
RNU6-550P-201ENST00000391057 BEND6Q5SZJ8 279 aaPredicted RBP2.17□□□□□ -2.06
RNU6-550P-201ENST00000391057 IL23RQ5VWK5 629 aa2.17□□□□□ -2.06
RNU6-550P-201ENST00000391057 PNCKQ6P2M8 343 aa2.17□□□□□ -2.06
RNU6-550P-201ENST00000391057 TAF8Q7Z7C8 310 aa2.17□□□□□ -2.06
RNU6-550P-201ENST00000391057 PARGQ86W56 976 aa2.17□□□□□ -2.06
RNU6-550P-201ENST00000391057 KRTAP11-1Q8IUC1 163 aa2.17□□□□□ -2.06
RNU6-550P-201ENST00000391057 SLC34A3Q8N130 599 aa2.17□□□□□ -2.06
RNU6-550P-201ENST00000391057 NEK11Q8NG66 645 aa2.17□□□□□ -2.06
RNU6-550P-201ENST00000391057 OR2L5Q8NG80 312 aa2.17□□□□□ -2.06
RNU6-550P-201ENST00000391057 ZNF564Q8TBZ8 553 aaPredicted RBP2.17□□□□□ -2.06
RNU6-550P-201ENST00000391057 ERVK-6Q9BXR3 956 aa2.17□□□□□ -2.06
RNU6-550P-201ENST00000391057 ASB8Q9H765 288 aa2.17□□□□□ -2.06
RNU6-550P-201ENST00000391057 DUS2Q9NX74 493 aaKnown RBP2.17□□□□□ -2.06
RNU6-550P-201ENST00000391057 ELOVL2Q9NXB9 296 aa2.17□□□□□ -2.06
RNU6-550P-201ENST00000391057 GHRLQ9UBU3 117 aa2.17□□□□□ -2.06
RNU6-550P-201ENST00000391057 KCNN3Q9UGI6 736 aa2.17□□□□□ -2.06
RNU6-550P-201ENST00000391057 ZNF490Q9ULM2 529 aaPredicted RBP2.17□□□□□ -2.06
RNU6-550P-201ENST00000391057 ABCG2Q9UNQ0 655 aa2.17□□□□□ -2.06
RNU6-550P-201ENST00000391057 GRIN2DO15399 1336 aa2.17□□□□□ -2.06
RNU6-550P-201ENST00000391057 RPGRIP1LQ68CZ1 1315 aa2.17□□□□□ -2.06
RNU6-550P-201ENST00000391057 RAD54L2Q9Y4B4 1467 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 A0A1W2PNU3 283 aaPredicted RBP2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 SLC9B1P1A6NJY1 282 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 CCER2I3L3R5 266 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 SERF1AO75920 110 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 TOXO94900 526 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 PGK1P00558 417 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 IGFBP1P08833 259 aaPredicted RBP2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 ZP3P21754 424 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 AHCYP23526 432 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 PTBP1P26599 531 aaKnown RBP eCLIP2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 STX17P56962 302 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 AP1B1Q10567 949 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 PKN2Q16513 984 aaKnown RBP2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 DCAF4L1Q3SXM0 396 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 LRIT3Q3SXY7 679 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 C2orf83Q53S99 150 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 OLFM4Q6UX06 510 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 HACD2Q6Y1H2 254 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 MIER3Q7Z3K6 550 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 ADGRD2Q7Z7M1 963 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 ARFGAP2Q8N6H7 521 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 ZNF713Q8N859 430 aaPredicted RBP2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 OR52E1Q8NGJ3 308 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 LINC01006Q8NI28 216 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 TADA1Q96BN2 335 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 RUFY1Q96T51 708 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 DPH7Q9BTV6 452 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 C19orf24Q9BVV8 132 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 TM2D1Q9BX74 207 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 TSSK1BQ9BXA7 367 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 ABCG8Q9H221 673 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 THAP9Q9H5L6 903 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 SYTL2Q9HCH5 934 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 TMEM9Q9P0T7 183 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 DNPEPQ9ULA0 475 aa2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 MTF2Q9Y483 593 aaPredicted RBP2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 CFAP65Q6ZU64 1925 aaKnown RBP2.16□□□□□ -2.06
RNU6-550P-201ENST00000391057 TNRQ92752 1358 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 FBLL1A6NHQ2 334 aaKnown RBP2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 CDX4O14627 284 aaPredicted RBP2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 HTATSF1O43719 755 aaKnown RBP2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 BAG2O95816 211 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 SLC4A1P02730 911 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 CCDC166P0CW27 439 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 CCDC192P0DO97 292 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 RALAP11233 206 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 SFNP31947 248 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 NF2P35240 595 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 UGT1A3P35503 534 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 TRPC1P48995 793 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 RPS6P62753 249 aaKnown RBP2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 MRPS6P82932 125 aaKnown RBP2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 ZP4Q12836 540 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 ZSWIM7Q19AV6 140 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 CCDC40Q4G0X9 1142 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 SLC10A5Q5PT55 438 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 SLX4IPQ5VYV7 408 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 DMKNQ6E0U4 476 aaPredicted RBP2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 ZNF544Q6NX49 715 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 LEG1Q6P5S2 330 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 FAM159AQ6UWV7 190 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 ZNF562Q6V9R5 426 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 WDR88Q6ZMY6 472 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 PAQR9Q6ZVX9 377 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 MOB1BQ7L9L4 216 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 NET1Q7Z628 596 aaPredicted RBP2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 RABEPKQ7Z6M1 372 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 C9orf40Q8IXQ3 194 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 CCDC36Q8IYA8 594 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 NUS1Q96E22 293 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 NSMCE2Q96MF7 247 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 GLT8D2Q9H1C3 349 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 MEPEQ9NQ76 525 aaPredicted RBP2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 GDAP2Q9NXN4 497 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 CLIP2Q9UDT6 1046 aa2.15□□□□□ -2.07
RNU6-550P-201ENST00000391057 FETUBQ9UGM5 382 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms