RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 CCDC7Q96M83 1385 aa5.8□□□□□ -1.48
TRAV35-201ENST00000390462 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.79□□□□□ -1.48
TRAV35-201ENST00000390462 SERINC4A6NH21 518 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 A8MU76 341 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 C2CD4DB7Z1M9 353 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 SMIM22K7EJ46 135 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 HIP1O00291 1037 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 WWP2O00308 870 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 SLC28A2O43868 658 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 ZNF623O75123 536 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 H6PDO95479 791 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 POU2F1P14859 743 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 ARSBP15848 533 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 GPX3P22352 226 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 ACKR3P25106 362 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 OTX1P32242 354 aaPredicted RBP5.79□□□□□ -1.48
TRAV35-201ENST00000390462 RORAP35398 523 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 HTR5AP47898 357 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 NDST1P52848 882 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 SRYQ05066 204 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 ASPHQ12797 758 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 ZNF177Q13360 481 aaPredicted RBP5.79□□□□□ -1.48
TRAV35-201ENST00000390462 ITGA9Q13797 1035 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 EXT1Q16394 746 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 MICBQ29980 383 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 CEP78Q5JTW2 689 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 PDZK1Q5T2W1 519 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 SLC25A25Q6KCM7 469 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 TTC23LQ6PF05 361 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 DHRS11Q6UWP2 260 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 STXBP4Q6ZWJ1 553 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 P4HA3Q7Z4N8 544 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 C5orf24Q7Z6I8 188 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 KIAA1328Q86T90 577 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 VRK2Q86Y07 508 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 RCOR2Q8IZ40 523 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 LMNTD1Q8N9Z9 388 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 CCDC197Q8NCU1 140 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 OR51G2Q8NGK0 314 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 OR4D5Q8NGN0 318 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 OR13C5Q8NGS8 318 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 ZNF596Q8TC21 504 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 SCARB1Q8WTV0 552 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 CCDC12Q8WUD4 166 aaPredicted RBP5.79□□□□□ -1.48
TRAV35-201ENST00000390462 LHX4Q969G2 390 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 SLC38A4Q969I6 547 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 TOP1MTQ969P6 601 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 SLC35C1Q96A29 364 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 CCM2Q9BSQ5 444 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 C20orf24Q9BUV8 137 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 RHOJQ9H4E5 214 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 PCDH9Q9HC56 1237 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 POLD4Q9HCU8 107 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 POLE4Q9NR33 117 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 C20orf96Q9NUD7 363 aaPredicted RBP5.79□□□□□ -1.48
TRAV35-201ENST00000390462 SLC38A7Q9NVC3 462 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 HIF1ANQ9NWT6 349 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 RNF186Q9NXI6 227 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.79□□□□□ -1.48
TRAV35-201ENST00000390462 ZNF319Q9P2F9 582 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 GNG12Q9UBI6 72 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 PITPNC1Q9UKF7 332 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 STUB1Q9UNE7 303 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 GAB2Q9UQC2 676 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 TNRC18O15417 2968 aaPredicted RBP5.79□□□□□ -1.48
TRAV35-201ENST00000390462 KCPQ6ZWJ8 1503 aa5.79□□□□□ -1.48
TRAV35-201ENST00000390462 VIRMAQ69YN4 1812 aaKnown RBP5.78□□□□□ -1.48
TRAV35-201ENST00000390462 SH3PXD2BA1X283 911 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 SMCO3A2RU48 225 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 GAGE12JA6NER3 117 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 RSPH10B2B2RC85 870 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 H0YL77 283 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 OVOL3O00110 214 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 PDLIM1O00151 329 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 MLNRO43193 412 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 TSPAN2O60636 221 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 ERCC1P07992 297 aaPredicted RBP5.78□□□□□ -1.48
TRAV35-201ENST00000390462 RSPH10BP0C881 870 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 TNNI1P19237 187 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 GSTM3P21266 225 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 RBMS1P29558 406 aaKnown RBP5.78□□□□□ -1.48
TRAV35-201ENST00000390462 NDST2P52849 883 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 RPS18P62269 152 aaKnown RBP5.78□□□□□ -1.48
TRAV35-201ENST00000390462 MFGE8Q08431 387 aaPredicted RBP5.78□□□□□ -1.48
TRAV35-201ENST00000390462 STK38Q15208 465 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 SGSM1Q2NKQ1 1148 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 CCDC88AQ3V6T2 1871 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 SBK1Q52WX2 424 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 LIMS2Q7Z4I7 341 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 SCD5Q86SK9 330 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 LDLRAD3Q86YD5 345 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 NKAIN4Q8IVV8 208 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 FAM58AQ8N1B3 248 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 PARP8Q8N3A8 854 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 OR4C15Q8NGM1 316 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 NDNFQ8TB73 568 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 NANPQ8TBE9 248 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 LRRC20Q8TCA0 184 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 MYLPFQ96A32 169 aa5.78□□□□□ -1.48
TRAV35-201ENST00000390462 PELI1Q96FA3 418 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms