RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 ZNF491Q8N8L2 437 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 NFAM1Q8NET5 270 aaPredicted RBP4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 RFESDQ8TAC1 157 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 TBCKQ8TEA7 893 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 CRYGNQ8WXF5 182 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 ART4Q93070 314 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 UPRTQ96BW1 309 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 VPS39Q96JC1 886 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 TTYH2Q9BSA4 534 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 UBXN6Q9BZV1 441 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 SENP1Q9P0U3 644 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 MLXQ9UH92 298 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 TMCC3Q9ULS5 477 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 RNF24Q9Y225 148 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 EIF3LQ9Y262 564 aaKnown RBP4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 CCDC7Q96M83 1385 aa4.35□□□□□ -1.71
RNU6-40P-201ENST00000384254 IGHV3OR16-12A0A075B7B8 117 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 TRIM49BA6NDI0 452 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 SHISA9B4DS77 424 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 E2F3O00716 465 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 IMPA2O14732 288 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 JAK2O60674 1132 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 SEMA4FO95754 770 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 IGFBP1P08833 259 aaPredicted RBP4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 ADSSP30520 456 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 DLSTP36957 453 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 ELP6Q0PNE2 266 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 TFDP1Q14186 410 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 UBE2V2Q15819 145 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 ZIC1Q15915 447 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 USH1GQ495M9 461 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 MS4A13Q5J8X5 152 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 SEL1L2Q5TEA6 688 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 ZNF772Q68DY9 489 aaPredicted RBP4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 ZNF343Q6P1L6 599 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 CSNK1G2-AS1Q8NCQ2 148 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 C17orf47Q8NEP4 570 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 OR2L2Q8NH16 312 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 FLVCR1-AS1Q8TAF5 88 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 WBP1Q96G27 269 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 AKR1E2Q96JD6 320 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 SOSTQ9BQB4 213 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 TBC1D10AQ9BXI6 508 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 MRPL13Q9BYD1 178 aaKnown RBP4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 TRIM6Q9C030 488 aaPredicted RBP4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 TIGARQ9NQ88 270 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 SNX6Q9UNH7 406 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 RNF6Q9Y252 685 aa4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 EXOSC1Q9Y3B2 195 aaKnown RBP4.34□□□□□ -1.71
RNU6-40P-201ENST00000384254 CARMIL1Q5VZK9 1371 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 A8MUI8 341 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 GALR3O60755 368 aaPredicted RBP4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 KRT8P05787 483 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 ASNSP08243 561 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 HOXD4P09016 255 aaPredicted RBP4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 ANXA3P12429 323 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 PVRP15151 417 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 PSMA5P28066 241 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 CYLC1P35663 651 aaPredicted RBP4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 SOX6P35712 828 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 CYLC2Q14093 348 aaPredicted RBP4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 CDKN3Q16667 212 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 SLC36A3Q495N2 470 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 LEMD1Q68G75 181 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 GALNT17Q6IS24 598 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 SLC39A4Q6P5W5 647 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 BTNL3Q6UXE8 466 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 HACD2Q6Y1H2 254 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 ARMCX2Q7L311 632 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 LHFPL4Q7Z7J7 247 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 SLC22A18ASQ8N1D0 253 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 OR5AU1Q8NGC0 362 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 DTNBP1Q96EV8 351 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 DNAJA3Q96EY1 480 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 SDSLQ96GA7 329 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 C9orf85Q96MD7 179 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 GFRA4Q9GZZ7 299 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 PALMDQ9NP74 551 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 AGPAT5Q9NUQ2 364 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 RCOR3Q9P2K3 495 aaPredicted RBP4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 GALPQ9UBC7 116 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 KLK13Q9UKR3 277 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 BARX2Q9UMQ3 279 aaPredicted RBP4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 B9D1Q9UPM9 204 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 STYXL1Q9Y6J8 313 aa4.33□□□□□ -1.72
RNU6-40P-201ENST00000384254 PARD3Q8TEW0 1356 aa4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 SF3B1O75533 1304 aaKnown RBP eCLIP4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 E9PAM4 449 aa4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 CLDN5O00501 218 aa4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 PPIHO43447 177 aaKnown RBP4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 LCMT2O60294 686 aaKnown RBP4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 PRAMEF12O95522 483 aa4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 HPP00738 406 aa4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 SDC1P18827 310 aa4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 ZNF33BQ06732 778 aa4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 MICAQ29983 383 aa4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 C17orf58Q2M2W7 97 aa4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 NHLRC3Q5JS37 347 aa4.32□□□□□ -1.72
RNU6-40P-201ENST00000384254 MEDAGQ5VYS4 303 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms