RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 SLC30A6Q6NXT4 461 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 Q6ZVU0 165 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 MS4A15Q8N5U1 240 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 BOLLQ8N9W6 283 aaKnown RBP13.04□□□□□ -0.32
SDC1-202ENST00000381150 ZNF527Q8NB42 609 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 OR4K5Q8NGD3 323 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 OR51G2Q8NGK0 314 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 GCDHQ92947 438 aaPredicted RBP13.04□□□□□ -0.32
SDC1-202ENST00000381150 EXOSC8Q96B26 276 aaKnown RBP13.04□□□□□ -0.32
SDC1-202ENST00000381150 HHIPQ96QV1 700 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 SECISBP2Q96T21 854 aaKnown RBP13.04□□□□□ -0.32
SDC1-202ENST00000381150 DPAGT1Q9H3H5 408 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 MRPL39Q9NYK5 338 aaKnown RBP13.04□□□□□ -0.32
SDC1-202ENST00000381150 CACNG2Q9Y698 323 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 RANBP2P49792 3224 aaKnown RBP13.04□□□□□ -0.32
SDC1-202ENST00000381150 ARID1AO14497 2285 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 TCRBV16S1A1N1A0A5B0 115 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 MID1O15344 667 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 IFNA16P05015 189 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 CPEP16870 476 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 CDH11P55287 796 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 MAZP56270 477 aaKnown RBP13.04□□□□□ -0.32
SDC1-202ENST00000381150 OR10A3P58181 314 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 FGL2Q14314 439 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 GGTA1PQ4G0N0 100 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 REEP3Q6NUK4 255 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 TCTN3Q6NUS6 607 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 PODNL1Q6PEZ8 512 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 COMMD6Q7Z4G1 85 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 KIAA0907Q7Z7F0 614 aaPredicted RBP13.04□□□□□ -0.32
SDC1-202ENST00000381150 OR8K5Q8NH50 307 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 TEX47Q8TBZ9 253 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 UCN3Q969E3 161 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 CREB3L1Q96BA8 519 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 NXPE2Q96DL1 559 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 METTL2AQ96IZ6 378 aaKnown RBP13.04□□□□□ -0.32
SDC1-202ENST00000381150 REEP4Q9H6H4 257 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 NLGN3Q9NZ94 848 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 TMEM5Q9Y2B1 443 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 SESN1Q9Y6P5 492 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 ANHXE9PGG2 379 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 STATHP02808 62 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 IL3P08700 152 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 ATP1B2P14415 290 aaPredicted RBP13.03□□□□□ -0.32
SDC1-202ENST00000381150 TIA1P31483 386 aaKnown RBP eCLIP13.03□□□□□ -0.322e-6■■■■□ 26.7
SDC1-202ENST00000381150 ERVFC1P60507 584 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 DEFA5Q01523 94 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 PRSS45Q7RTY3 260 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 L3MBTL4Q8NA19 623 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 OR5D16Q8NGK9 328 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 SPRYD4Q8WW59 207 aaPredicted RBP13.03□□□□□ -0.32
SDC1-202ENST00000381150 GIMAP1Q8WWP7 306 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 ASB12Q8WXK4 309 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 OR4K3Q96R72 315 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 DDOQ99489 341 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.03□□□□□ -0.32
SDC1-202ENST00000381150 ZFP64Q9NPA5 681 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 C1GALT1Q9NS00 363 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 BTNL2Q9UIR0 455 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 FLVCR2Q9UPI3 526 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 RASD1Q9Y272 281 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 MYO15AQ9UKN7 3530 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 NPIPB8E9PQR5 432 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 TRIM3O75382 744 aaPredicted RBP13.03□□□□□ -0.32
SDC1-202ENST00000381150 HLA-DPB1P04440 258 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 NR2F1P10589 423 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 NAGAP17050 411 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 PRPH2P23942 346 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 SHC1P29353 583 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 ZNF630Q2M218 657 aaPredicted RBP13.03□□□□□ -0.32
SDC1-202ENST00000381150 PGBD2Q6P3X8 592 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 ZNF613Q6PF04 617 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 ADGRF3Q8IZF5 1079 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 CPA6Q8N4T0 437 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 HORMAD2Q8N7B1 307 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 ZNF740Q8NDX6 193 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 SLC38A5Q8WUX1 472 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 ELMOD3Q96FG2 381 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 PLA2G12AQ9BZM1 189 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 QRSL1Q9H0R6 528 aaKnown RBP13.03□□□□□ -0.32
SDC1-202ENST00000381150 TTYH1Q9H313 450 aaPredicted RBP13.03□□□□□ -0.32
SDC1-202ENST00000381150 MGAT4BQ9UQ53 548 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 CSNK1G3Q9Y6M4 447 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 LINC00862A6NCI5 91 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 NEDD8-MDP1E9PL57 170 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 TPPPO94811 219 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 TPOP07202 933 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 ACSM4P0C7M7 580 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 ATXN8OSP0DMR3 200 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 LCN1P31025 176 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 RAE1P78406 368 aaKnown RBP13.03□□□□□ -0.32
SDC1-202ENST00000381150 ILKQ13418 452 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 SLBPQ14493 270 aaKnown RBP eCLIP13.03□□□□□ -0.32
SDC1-202ENST00000381150 ZDHHC20Q5W0Z9 365 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 GDPD4Q6W3E5 623 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 TMEM91Q6ZNR0 172 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 MSANTD1Q6ZTZ1 278 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 HSD11B1LQ7Z5J1 315 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 OR6M1Q8NGM8 313 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 SMAP2Q8WU79 429 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms