RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 PIGUQ9H490 435 aa11.67□□□□□ -0.54
SMN1-202ENST00000380707 TRIM45Q9H8W5 580 aaPredicted RBP11.67□□□□□ -0.54
SMN1-202ENST00000380707 Q9N2J8 555 aa11.67□□□□□ -0.54
SMN1-202ENST00000380707 DUSP22Q9NRW4 184 aa11.67□□□□□ -0.54
SMN1-202ENST00000380707 GIN1Q9NXP7 522 aa11.67□□□□□ -0.54
SMN1-202ENST00000380707 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.67□□□□□ -0.54
SMN1-202ENST00000380707 ZNF451Q9Y4E5 1061 aa11.67□□□□□ -0.54
SMN1-202ENST00000380707 PCDHGB7Q9Y5F8 929 aa11.67□□□□□ -0.54
SMN1-202ENST00000380707 OR5H15A6NDH6 313 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 A8MVJ9 347 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 HMGN4O00479 90 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 NEURL1O76050 574 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 KCNK2O95069 426 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 CBX6O95503 412 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 NPPAP01160 153 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 IGKV1D-16P01601 117 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 KRT16P08779 473 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 ETFAP13804 333 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 PIGAP37287 484 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 CRATP43155 626 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 CPA2P48052 419 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 TNFSF10P50591 281 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 FBXW4P57775 412 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 ARG2P78540 354 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 MRPS22P82650 360 aaKnown RBP11.66□□□□□ -0.54
SMN1-202ENST00000380707 OC90Q02509 493 aaPredicted RBP11.66□□□□□ -0.54
SMN1-202ENST00000380707 PLCXD2Q0VAA5 305 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 LY6DQ14210 128 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 SELPLGQ14242 412 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 RGNQ15493 299 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 OR1C1Q15619 314 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 DESI1Q6ICB0 168 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 NANOGP8Q6NSW7 305 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 OPN5Q6U736 354 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 ASB18Q6ZVZ8 466 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 TRPM8Q7Z2W7 1104 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 MDGA2Q7Z553 956 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 GALNT10Q86SR1 603 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 COX18Q8N8Q8 333 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 OR52N2Q8NGI0 321 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 OR5M3Q8NGP4 307 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 XAGE5Q8WWM1 108 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 EFHD2Q96C19 240 aaPredicted RBP11.66□□□□□ -0.54
SMN1-202ENST00000380707 SPACA9Q96E40 222 aaPredicted RBP11.66□□□□□ -0.54
SMN1-202ENST00000380707 RMND5BQ96G75 393 aaPredicted RBP11.66□□□□□ -0.54
SMN1-202ENST00000380707 ADOQ96SZ5 270 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 CPPED1Q9BRF8 314 aaPredicted RBP11.66□□□□□ -0.54
SMN1-202ENST00000380707 BTBD2Q9BX70 525 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 NANOGQ9H9S0 305 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 EFCAB1Q9HAE3 211 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 FBXO34Q9NWN3 711 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 HPF1Q9NWY4 346 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 LRFN1Q9P244 771 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 TAGLN3Q9UI15 199 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 GMEB1Q9Y692 573 aa11.66□□□□□ -0.54
SMN1-202ENST00000380707 PRAMEF27A3QJZ7 478 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 DUXAA6NLW8 204 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 CDK2AP1O14519 115 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 ASNA1O43681 348 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 TSPAN2O60636 221 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 REM1O75628 298 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 PPM1BO75688 479 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 NAGAP17050 411 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 KHKP50053 298 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 MTPNP58546 118 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 PSPHP78330 225 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 POU6F2P78424 691 aaPredicted RBP11.65□□□□□ -0.54
SMN1-202ENST00000380707 NTRK2Q16620 822 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 DECR1Q16698 335 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 LACTB2Q53H82 288 aaPredicted RBP11.65□□□□□ -0.54
SMN1-202ENST00000380707 CCNJQ5T5M9 372 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 FIGNL1Q6PIW4 674 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 CYP4Z2PQ8N1L4 340 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 ZADH2Q8N4Q0 377 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 RBMXL3Q8N7X1 1067 aaKnown RBP11.65□□□□□ -0.54
SMN1-202ENST00000380707 OR10G3Q8NGC4 313 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 FAM110BQ8TC76 370 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 TM9SF4Q92544 642 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 DIO2Q92813 273 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 ROPN1LQ96C74 230 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.65□□□□□ -0.54
SMN1-202ENST00000380707 GID8Q9NWU2 228 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 LHX6Q9UPM6 363 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 PCDHGB3Q9Y5G1 929 aa11.65□□□□□ -0.54
SMN1-202ENST00000380707 OR6C70A6NIJ9 312 aa11.65□□□□□ -0.55
SMN1-202ENST00000380707 EVPLLA8MZ36 301 aa11.65□□□□□ -0.55
SMN1-202ENST00000380707 UGT2B11O75310 529 aa11.65□□□□□ -0.55
SMN1-202ENST00000380707 SOX30O94993 753 aa11.65□□□□□ -0.55
SMN1-202ENST00000380707 IL33O95760 270 aa11.65□□□□□ -0.55
SMN1-202ENST00000380707 NUDT7P0C024 238 aa11.65□□□□□ -0.55
SMN1-202ENST00000380707 T-ENOLP0DO92 83 aa11.65□□□□□ -0.55
SMN1-202ENST00000380707 GPX2P18283 190 aa11.65□□□□□ -0.55
SMN1-202ENST00000380707 PPIBP23284 216 aaKnown RBP11.65□□□□□ -0.55
SMN1-202ENST00000380707 CASRP41180 1078 aa11.65□□□□□ -0.55
SMN1-202ENST00000380707 RFX3P48380 749 aa11.65□□□□□ -0.55
SMN1-202ENST00000380707 TMED10P49755 219 aaKnown RBP11.65□□□□□ -0.55
SMN1-202ENST00000380707 NUDT2P50583 147 aa11.65□□□□□ -0.55
SMN1-202ENST00000380707 FUT5Q11128 374 aa11.65□□□□□ -0.55
SMN1-202ENST00000380707 ART3Q13508 389 aa11.65□□□□□ -0.55
SMN1-202ENST00000380707 RABL3Q5HYI8 236 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms