RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 RAD52P43351 418 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 CHRNA4P43681 627 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 OR1G1P47890 313 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 MAT1AQ00266 395 aaKnown RBP8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 NFKB2Q00653 900 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 DHODHQ02127 395 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 NHLH2Q02577 135 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 ABHD18Q0P651 414 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 GOLGA7BQ2TAP0 167 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 MINDY4Q4G0A6 757 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 TMEM31Q5JXX7 168 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 FBXO46Q6PJ61 603 aaPredicted RBP8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 UQCC3Q6UW78 93 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 GNPDA2Q8TDQ7 276 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 CLEC4CQ8WTT0 213 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 POP5Q969H6 163 aaKnown RBP8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 GAL3ST3Q96A11 431 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 CNTNAP3BQ96NU0 1288 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 TBL1YQ9BQ87 522 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 DPH2Q9BQC3 489 aaPredicted RBP8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 INPP5KQ9BT40 448 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 TSSK6Q9BXA6 273 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 SMOC1Q9H4F8 434 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 FZD3Q9NPG1 666 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 RASL12Q9NYN1 266 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 SLC28A2O43868 658 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 B4GALT3O60512 393 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 GALR3O60755 368 aaPredicted RBP8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 SNAPC5O75971 98 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 FGF19O95750 216 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 B3GALT4O96024 378 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 EIF4EP06730 217 aaKnown RBP8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 CLUP10909 449 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 ABOP16442 354 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 UQCRC2P22695 453 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 NOS3P29474 1203 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 PPM1AP35813 382 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 STAT5AP42229 794 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 SLC11A2P49281 568 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 MVDP53602 400 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 CARD18P57730 90 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 PKIAP61925 76 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 INSL4Q14641 139 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 DHCR24Q15392 516 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 TKFCQ3LXA3 575 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 SPNS3Q6ZMD2 512 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 ETV3LQ6ZN32 361 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 TIPARPQ7Z3E1 657 aaKnown RBP8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 ZNF227Q86WZ6 799 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 LRRC18Q8N456 261 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 FAM46DQ8NEK8 389 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 MED8Q96G25 268 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 C12orf42Q96LP6 360 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 TMEM185BQ9H7F4 350 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 HEBP1Q9NRV9 189 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 C19orf12Q9NSK7 152 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 WWOXQ9NZC7 414 aa8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 DDX60LQ5H9U9 1706 aaKnown RBP8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.03□□□□□ -1.12
NHLRC3-201ENST00000379599 CD8B2A6NJW9 211 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 OR6C76A6NM76 312 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 FOXE1O00358 373 aaPredicted RBP8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 MPZL2O60487 215 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 CYTIPO60759 359 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 AQP8O94778 261 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 HLA-DOAP06340 250 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 UBCP0CG48 685 aaKnown RBP8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 CD8BP10966 210 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 LCP1P13796 627 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 FOLR2P14207 255 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 XPAP23025 273 aaPredicted RBP8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 CPT2P23786 658 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 ADH6P28332 368 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 OMPP47874 163 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 AP3S2P59780 193 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 IL10RBQ08334 325 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 NAE1Q13564 534 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 SLC9A5Q14940 896 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 SLC36A2Q495M3 483 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 DCAF8Q5TAQ9 597 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 C9orf131Q5VYM1 1079 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 PDZD4Q76G19 769 aaPredicted RBP8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 LHFPL3Q86UP9 236 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 VSIG10LQ86VR7 867 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 OR56A4Q8NGH8 313 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 OR10D4PQ8NGN7 298 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 MAFIPQ8WZ33 124 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 HIST1H2BAQ96A08 127 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 F2RL3Q96RI0 385 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 OSMRQ99650 979 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 SMAD5Q99717 465 aaKnown RBP8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 CPPED1Q9BRF8 314 aaPredicted RBP8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 ZMYM5Q9UJ78 669 aa8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 AAR2Q9Y312 384 aaKnown RBP8.02□□□□□ -1.12
NHLRC3-201ENST00000379599 C2orf78A6NCI8 922 aa8.02□□□□□ -1.13
NHLRC3-201ENST00000379599 TMEM189-UBE2V1I3L0A0 370 aa8.02□□□□□ -1.13
NHLRC3-201ENST00000379599 TLR4O00206 839 aa8.02□□□□□ -1.13
NHLRC3-201ENST00000379599 TXNDC12O95881 172 aa8.02□□□□□ -1.13
NHLRC3-201ENST00000379599 IFNA10P01566 189 aa8.02□□□□□ -1.13
NHLRC3-201ENST00000379599 WNT1P04628 370 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms