RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 HOXC5Q00444 222 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 TUBA3CQ13748 450 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 KCNAB1Q14722 419 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 LARS2Q15031 903 aaKnown RBP14.03□□□□□ -0.16
SNX2-201ENST00000379516 AMZ1Q400G9 498 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 TCTE1Q5JU00 501 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 GARNL3Q5VVW2 1013 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 AHSA2Q719I0 299 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 OR52R1Q8NGF1 315 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 IPCEF1Q8WWN9 437 aaPredicted RBP14.03□□□□□ -0.16
SNX2-201ENST00000379516 MUL1Q969V5 352 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 STACQ99469 402 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 CCNB1IP1Q9NPC3 277 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 DUSP22Q9NRW4 184 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 REV1Q9UBZ9 1251 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 PCDHGA10Q9Y5H3 936 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 SCN2AQ99250 2005 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 IGHV1OR21-1A0A087WYE8 117 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 H3BN98 237 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 M0R129 80 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 CTNSO60931 367 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 INMTO95050 263 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 CBX7O95931 251 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 MT-ND2P03891 347 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 IGFBP1P08833 259 aaPredicted RBP14.03□□□□□ -0.16
SNX2-201ENST00000379516 MYF5P13349 255 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 ITIH1P19827 911 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 GABRA3P34903 492 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 MAP2K4P45985 399 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 RGS8P57771 180 aaPredicted RBP14.03□□□□□ -0.16
SNX2-201ENST00000379516 ZNF155Q12901 538 aaPredicted RBP14.03□□□□□ -0.16
SNX2-201ENST00000379516 EXOSC6Q5RKV6 272 aaKnown RBP14.03□□□□□ -0.16
SNX2-201ENST00000379516 ERI1Q8IV48 349 aaKnown RBP14.03□□□□□ -0.16
SNX2-201ENST00000379516 GALNT12Q8IXK2 581 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 SLC35F3Q8IY50 421 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 ZNF595Q8IYB9 648 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 Q8N9G6 341 aaPredicted RBP14.03□□□□□ -0.16
SNX2-201ENST00000379516 OR4K5Q8NGD3 323 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 OR6C4Q8NGE1 309 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 RBM18Q96H35 190 aaKnown RBP14.03□□□□□ -0.16
SNX2-201ENST00000379516 CD180Q99467 661 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 ZNF350Q9GZX5 532 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 POLR2J3Q9H1A7 115 aaKnown RBP14.03□□□□□ -0.16
SNX2-201ENST00000379516 SLC24A3Q9HC58 644 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 PRTFDC1Q9NRG1 225 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 PCDHGB1Q9Y5G3 927 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 OR2W5A6NFC9 320 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 H3BMQ9 156 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 TGFBR3LH3BV60 316 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 CLDN4O14493 209 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 AP3D1O14617 1153 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 NUDT21O43809 227 aaKnown RBP14.02□□□□□ -0.16
SNX2-201ENST00000379516 NOL3O60936 208 aaKnown RBP14.02□□□□□ -0.16
SNX2-201ENST00000379516 STX11O75558 287 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 IFI6P09912 130 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 CNR2P34972 360 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 TRHRP34981 398 aaPredicted RBP14.02□□□□□ -0.16
SNX2-201ENST00000379516 DHPSP49366 369 aaPredicted RBP14.02□□□□□ -0.16
SNX2-201ENST00000379516 ARL4DP49703 201 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 BTG2P78543 158 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 LSM11P83369 360 aaKnown RBP eCLIP14.02□□□□□ -0.16
SNX2-201ENST00000379516 MAP4K2Q12851 820 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 ILKQ13418 452 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 SNAP47Q5SQN1 464 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 FIGNL1Q6PIW4 674 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 CCDC81Q6ZN84 652 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 ZNF836Q6ZNA1 936 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 ZER1Q7Z7L7 766 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 ZNF619Q8N2I2 560 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 LINC00471Q8N535 108 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 MORN4Q8NDC4 146 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 FAR1Q8WVX9 515 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 RIT1Q92963 219 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 SLC38A4Q969I6 547 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 COG8Q96MW5 612 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 ALOXE3Q9BYJ1 711 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 ERVMER34-1Q9H9K5 563 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 AMBNQ9NP70 447 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 C11orf16Q9NQ32 467 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 FBXO34Q9NWN3 711 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 WARS2Q9UGM6 360 aaKnown RBP14.02□□□□□ -0.16
SNX2-201ENST00000379516 SLC6A14Q9UN76 642 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 SATB2Q9UPW6 733 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 NINQ8N4C6 2090 aa14.02□□□□□ -0.16
SNX2-201ENST00000379516 CENPVL1A0A0U1RR11 272 aa14.02□□□□□ -0.17
SNX2-201ENST00000379516 AGAP5A6NIR3 686 aa14.02□□□□□ -0.17
SNX2-201ENST00000379516 ZNF99A8MXY4 864 aaPredicted RBP14.02□□□□□ -0.17
SNX2-201ENST00000379516 MAN1A2O60476 641 aa14.02□□□□□ -0.17
SNX2-201ENST00000379516 COQ9O75208 318 aa14.02□□□□□ -0.17
SNX2-201ENST00000379516 CYP7B1O75881 506 aa14.02□□□□□ -0.17
SNX2-201ENST00000379516 GLB1P16278 677 aa14.02□□□□□ -0.17
SNX2-201ENST00000379516 GABRB1P18505 474 aa14.02□□□□□ -0.17
SNX2-201ENST00000379516 MMP11P24347 488 aa14.02□□□□□ -0.17
SNX2-201ENST00000379516 IFNA8P32881 189 aa14.02□□□□□ -0.17
SNX2-201ENST00000379516 NUDT6P53370 316 aa14.02□□□□□ -0.17
SNX2-201ENST00000379516 DUSP8Q13202 625 aa14.02□□□□□ -0.17
SNX2-201ENST00000379516 ENTPD8Q5MY95 495 aa14.02□□□□□ -0.17
SNX2-201ENST00000379516 PRSS48Q7RTY5 328 aa14.02□□□□□ -0.17
SNX2-201ENST00000379516 OR51Q1Q8NH59 317 aa14.02□□□□□ -0.17
SNX2-201ENST00000379516 ADAMTS18Q8TE60 1221 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms