RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 ZNF155Q12901 538 aaPredicted RBP16.33■□□□□ 0.21
LYSMD4-203ENST00000378904 LAPTM4AQ15012 233 aa16.33■□□□□ 0.21
LYSMD4-203ENST00000378904 ANKRD34AQ69YU3 496 aa16.33■□□□□ 0.21
LYSMD4-203ENST00000378904 PWWP2BQ6NUJ5 590 aa16.33■□□□□ 0.21
LYSMD4-203ENST00000378904 FRRS1Q6ZNA5 592 aa16.33■□□□□ 0.21
LYSMD4-203ENST00000378904 PIK3R3Q92569 461 aa16.33■□□□□ 0.21
LYSMD4-203ENST00000378904 TFAP2CQ92754 450 aa16.33■□□□□ 0.21
LYSMD4-203ENST00000378904 ADI1Q9BV57 179 aa16.33■□□□□ 0.21
LYSMD4-203ENST00000378904 CNPPD1Q9BV87 410 aa16.33■□□□□ 0.21
LYSMD4-203ENST00000378904 USE1Q9NZ43 259 aa16.33■□□□□ 0.21
LYSMD4-203ENST00000378904 ENPP4Q9Y6X5 453 aa16.33■□□□□ 0.21
LYSMD4-203ENST00000378904 TRIM64CA6NLI5 447 aa16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 ADAMDEC1O15204 470 aa16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 DNAJB5O75953 348 aa16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 ALPPP05187 535 aa16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 TNNI3P19429 210 aa16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 EMDP50402 254 aa16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 PGDP52209 483 aa16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 SF3A2Q15428 464 aaKnown RBP16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 CCNJQ5T5M9 372 aa16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 COMTD1Q86VU5 262 aa16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 COX18Q8N8Q8 333 aa16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 SLC38A9Q8NBW4 561 aa16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 CHDHQ8NE62 594 aaPredicted RBP16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 GPR151Q8TDV0 419 aa16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 HOXB13Q92826 284 aaPredicted RBP16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 TSLPQ969D9 159 aa16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 ZG16BQ96DA0 208 aa16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 NRBF2Q96F24 287 aa16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 SDF2Q99470 211 aa16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 EPYCQ99645 322 aa16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 FOLH1BQ9HBA9 442 aa16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 MKKSQ9NPJ1 570 aaPredicted RBP16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 MKLN1Q9UL63 735 aa16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 ERVK-19Q9WJR5 959 aa16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 FAM32AQ9Y421 112 aaKnown RBP16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 PCDHGB3Q9Y5G1 929 aa16.33■□□□□ 0.2
LYSMD4-203ENST00000378904 ZNF318Q5VUA4 2279 aa16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 IGKV3D-11A0A0A0MRZ8 115 aa16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 CSTF2P33240 577 aaKnown RBP eCLIP16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 GABRA3P34903 492 aa16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 SPIBQ01892 262 aa16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 RHAGQ02094 409 aa16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 ZFP36L1Q07352 338 aaKnown RBP16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 FUT7Q11130 342 aa16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 TRA2AQ13595 282 aaKnown RBP eCLIP16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 DCST2Q5T1A1 773 aa16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 TYW3Q6IPR3 259 aaKnown RBP16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 COX15Q7KZN9 410 aa16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 PPP1R3BQ86XI6 285 aa16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 CROCCP3Q8IVE0 287 aa16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 VANGL1Q8TAA9 524 aaPredicted RBP16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 ZNF578Q96N58 590 aaPredicted RBP16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 WFDC6Q9BQY6 131 aa16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 PINK1Q9BXM7 581 aa16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 GABARAPL1Q9H0R8 117 aa16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 APMAPQ9HDC9 416 aa16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 SLC22A11Q9NSA0 550 aa16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 PNPLA3Q9NST1 481 aa16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 TBCCD1Q9NVR7 557 aa16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 SATB2Q9UPW6 733 aa16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 MYRFQ9Y2G1 1151 aa16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 WDR45Q9Y484 360 aa16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 HEMK1Q9Y5R4 338 aaPredicted RBP16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 LYVE1Q9Y5Y7 322 aa16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 GPR179Q6PRD1 2367 aa16.32■□□□□ 0.2
LYSMD4-203ENST00000378904 C17orf105B2RV13 164 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 CDX4O14627 284 aaPredicted RBP16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 NKX2-2O95096 273 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 EPPINO95925 133 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 THRBP10828 461 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 RHCEP18577 417 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 EFNA3P52797 238 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 NUBP1P53384 320 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 SLC36A3Q495N2 470 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 ZNF311Q5JNZ3 666 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 ZNF554Q86TJ5 538 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 LACC1Q8IV20 430 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 OR4D11Q8NGI4 311 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 CLIP3Q96DZ5 547 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 PIP5K1AQ99755 562 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 LMF2Q9BU23 707 aaKnown RBP16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 PNO1Q9NRX1 252 aaKnown RBP16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 PDP1Q9P0J1 537 aaPredicted RBP16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 COL27A1Q8IZC6 1860 aaPredicted RBP16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 EFCAB7A8K855 629 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 TNFRSF11BO00300 401 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 HS6ST1O60243 411 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 PRAMEF2O60811 474 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 ZNF806P0C7X5 589 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 CDH12P55289 794 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 PSG6Q00889 435 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 GANABQ14697 944 aaKnown RBP16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 ZIK1Q3SY52 487 aaPredicted RBP16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 Q6ZNX1 250 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 ZNF605Q86T29 641 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 VRK2Q86Y07 508 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 RBM45Q8IUH3 476 aaKnown RBP16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 PRSS58Q8IYP2 241 aa16.31■□□□□ 0.2
LYSMD4-203ENST00000378904 DHRSXQ8N5I4 330 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms