RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 GALNT12Q8IXK2 581 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 PIGXQ8TBF5 258 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 RFKQ969G6 155 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 DEPDC7Q96QD5 511 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 ARHGDIGQ99819 225 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 TEX101Q9BY14 249 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 TRDV1A0A1B0GX56 115 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 APEX1P27695 318 aaKnown RBP13.64□□□□□ -0.23
MSH5-201ENST00000375703 TRHRP34981 398 aaPredicted RBP13.64□□□□□ -0.23
MSH5-201ENST00000375703 SOX18P35713 384 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 KIR2DL3P43628 341 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 AVPR1BP47901 424 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 PPP3R1P63098 170 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 HOXC5Q00444 222 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.64□□□□□ -0.23
MSH5-201ENST00000375703 LCN1P1Q5VSP4 162 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 PPP2R2DQ66LE6 453 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 SLC30A6Q6NXT4 461 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 CD200R1LQ6Q8B3 271 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 GJD3Q8N144 294 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 OR4F15Q8NGB8 312 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 DIO2Q92813 273 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 TTYH2Q9BSA4 534 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 TEX12Q9BXU0 123 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 HDHD5Q9BXW7 423 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 WDR26Q9H7D7 661 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 RNF121Q9H920 327 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 TBC1D17Q9HA65 648 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 CES1P1Q9UKY3 287 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 KCNK6Q9Y257 313 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 LALBAP00709 142 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 GNSP15586 552 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 MC3RP41968 323 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 RAB8AP61006 207 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 CDK10Q15131 360 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 SLC48A1Q6P1K1 146 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 NKAIN4Q8IVV8 208 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 ASCC1Q8N9N2 400 aaKnown RBP13.64□□□□□ -0.23
MSH5-201ENST00000375703 ZNF485Q8NCK3 441 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 C19orf18Q8NEA5 215 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 OR2L5Q8NG80 312 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 OR2L8Q8NGY9 312 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 ENKURQ8TC29 256 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 SLC7A6Q92536 515 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 OSTF1Q92882 214 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 ELP4Q96EB1 424 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 TMED9Q9BVK6 235 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 IL23AQ9NPF7 189 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 NDRG2Q9UN36 371 aaKnown RBP13.64□□□□□ -0.23
MSH5-201ENST00000375703 BOLA1Q9Y3E2 137 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 MYO7AQ13402 2215 aa13.64□□□□□ -0.23
MSH5-201ENST00000375703 RFXAPO00287 272 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 PAK4O96013 591 aaPredicted RBP13.63□□□□□ -0.23
MSH5-201ENST00000375703 F3P13726 295 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 NAT1P18440 290 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 CELP19835 753 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 CERS1P27544 350 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 DRD3P35462 400 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 TRIM23P36406 574 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 STAT5AP42229 794 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 VEGFBP49765 207 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 DSG2Q14126 1118 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 FAM78AQ5JUQ0 283 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 C16orf62Q7Z3J2 963 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 TRIM48Q8IWZ4 208 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 POGLUT1Q8NBL1 392 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 OR9A2Q8NGT5 310 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 UBASH3BQ8TF42 649 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 RANGRFQ9HD47 186 aaPredicted RBP13.63□□□□□ -0.23
MSH5-201ENST00000375703 SLC6A20Q9NP91 592 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 GIMAP4Q9NUV9 329 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 KLHL28Q9NXS3 571 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 CALML5Q9NZT1 146 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 LIPT1Q9Y234 373 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 SURF4O15260 269 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 MID1O15344 667 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 HPGDSO60760 199 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 SLC2A2P11168 524 aaPredicted RBP13.63□□□□□ -0.23
MSH5-201ENST00000375703 PKLRP30613 574 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 ATP6V1E1P36543 226 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 RACK1P63244 317 aaKnown RBP13.63□□□□□ -0.23
MSH5-201ENST00000375703 DMPKQ09013 629 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 QPRTQ15274 297 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 AADACL4Q5VUY2 407 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 CNIH2Q6PI25 160 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 C12orf76Q8N812 135 aaPredicted RBP13.63□□□□□ -0.23
MSH5-201ENST00000375703 TMEM145Q8NBT3 493 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 OR4Q3Q8NH05 313 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 KAT2AQ92830 837 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 CXXC1Q9P0U4 656 aaPredicted RBP13.63□□□□□ -0.23
MSH5-201ENST00000375703 NTNG1Q9Y2I2 539 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 CHST2Q9Y4C5 530 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 PLEKHM1Q9Y4G2 1056 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 ZNF780BQ9Y6R6 833 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 OR52A4PA6NMU1 304 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 GPR89AB7ZAQ6 455 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 PROM1O43490 865 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 FCMRO60667 390 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 HLA-DPB1P04440 258 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 GPR89BP0CG08 455 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms