RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 TRIOBPQ9H2D6 2365 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 GLOD5A6NK44 160 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 ORC5O43913 435 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 PAHP00439 452 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 STATHP02808 62 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 ELK1P19419 428 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 POU3F3P20264 500 aaPredicted RBP13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 ZNF155Q12901 538 aaPredicted RBP13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 FAM83HQ6ZRV2 1179 aaPredicted RBP13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 ZNF547Q8IVP9 402 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 FBXO15Q8NCQ5 510 aaPredicted RBP13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 TEX47Q8TBZ9 253 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 RSPRY1Q96DX4 576 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 GTPBP2Q9BX10 602 aaKnown RBP13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 MKRN2Q9H000 416 aaKnown RBP13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 HDHD2Q9H0R4 259 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 NEUROD4Q9HD90 331 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 AHSPQ9NZD4 102 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 P2RX2Q9UBL9 471 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 TAC3Q9UHF0 121 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 ASF1AQ9Y294 204 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 ATG2AQ2TAZ0 1938 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 PI15O43692 258 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 SLC43A1O75387 559 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 POP7O75817 140 aaKnown RBP13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 CHRM4P08173 479 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 TYRP14679 529 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 PTNP21246 168 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 MAB21L1Q13394 359 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 SF3A2Q15428 464 aaKnown RBP13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 MINDY4Q4G0A6 757 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 FAM205BPQ63HN1 556 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 SLC30A6Q6NXT4 461 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 IL20RBQ6UXL0 311 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 TRILQ7L0X0 811 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 DPPA4Q7L190 304 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 NR2C2APQ86WQ0 139 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 TIGD4Q8IY51 512 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 SLC38A6Q8IZM9 456 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 PLA2G15Q8NCC3 412 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 BBS1Q8NFJ9 593 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 UBE2E3Q969T4 207 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 FAM46AQ96IP4 442 aaKnown RBP13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 ZDHHC5Q9C0B5 715 aa13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 EXOSC1Q9Y3B2 195 aaKnown RBP13.26□□□□□ -0.29
CLCNKA-202ENST00000375692 BRWD1Q9NSI6 2320 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 NOS1APO75052 506 aaPredicted RBP13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 PSMB5P28074 263 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 IFNA8P32881 189 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 MMP12P39900 470 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 MAPK9P45984 424 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 CDH11P55287 796 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 RAB8AP61006 207 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 MRPL28Q13084 256 aaKnown RBP13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 NDUFA9Q16795 377 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 ARHGAP15Q53QZ3 475 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 CREB3L2Q70SY1 520 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 KRT78Q8N1N4 520 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 ANGPTL6Q8NI99 470 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 SPRYD4Q8WW59 207 aaPredicted RBP13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 SLC35G5Q96KT7 338 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 ART5Q96L15 291 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 ZCCHC3Q9NUD5 404 aaKnown RBP13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 STMN3Q9NZ72 180 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 MAT2BQ9NZL9 334 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 IL36AQ9UHA7 158 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 SLC9A8Q9Y2E8 581 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 H7BY64 318 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 FABP7O15540 132 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 AKAP8O43823 692 aaKnown RBP13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 TRIM3O75382 744 aaPredicted RBP13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 UBXN7O94888 489 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 SLC2A10O95528 541 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 SERPIND1P05546 499 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 ZNF750Q32MQ0 723 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 ZNF805Q5CZA5 627 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 KLBQ86Z14 1044 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 OTULINQ96BN8 352 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 ZG16BQ96DA0 208 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 MAP6Q96JE9 813 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 MRGPRX3Q96LB0 322 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 PRAP1Q96NZ9 151 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 MS4A8Q9BY19 250 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 GLIPR2Q9H4G4 154 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 ISYNA1Q9NPH2 558 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 EXTL2Q9UBQ6 330 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 GPR55Q9Y2T6 319 aaPredicted RBP13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 KCNE3Q9Y6H6 103 aa13.25□□□□□ -0.29
CLCNKA-202ENST00000375692 A0A0A6YYJ9 748 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 FAM170BA6NMN3 283 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 KPNA3O00505 521 aaPredicted RBP13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 TFPIP10646 304 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 GNSP15586 552 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 ACADLP28330 430 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 FUT5Q11128 374 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 GPR176Q14439 515 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 FCN2Q15485 313 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 RAB30Q15771 203 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 TCEAL5Q5H9L2 206 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 IDNKQ5T6J7 187 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms