RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 MEDAGQ5VYS4 303 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 B3GNT4Q9C0J1 378 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 CLEC4MQ9H2X3 399 aaPredicted RBP16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 NCOR1O75376 2440 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 ZNF831Q5JPB2 1677 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 FURINP09958 794 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 C7P10643 843 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 PEPDP12955 493 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 ACVR1BP36896 505 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 GBX1Q14549 363 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 DNM1P34Q6PK57 102 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 LINGO2Q7L985 606 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 GALNTL5Q7Z4T8 443 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 JAGN1Q8N5M9 183 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 GATAD2BQ8WXI9 593 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 CXorf36Q9H7Y0 433 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 TUBA8Q9NY65 449 aaPredicted RBP16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 A0A1W2PRG6 482 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 SAGE2PA6NJ88 616 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 RAB36O95755 333 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 HSD11B1P28845 292 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 ENTPD1P49961 510 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 LIN54Q6MZP7 749 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 Q6ZPB1 254 aaPredicted RBP16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 Q6ZS52 159 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 MEIOBQ8N635 442 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 OR8J2Q8NGG1 315 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 TBC1D20Q96BZ9 403 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 MSLNLQ96KJ4 702 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 MCCC2Q9HCC0 563 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 CSNK1G3Q9Y6M4 447 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 SRCAPQ6ZRS2 3230 aa16.92■□□□□ 0.3
PTPDC1-202ENST00000375360 ZNF670-ZNF695F2Z2N8 137 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 CCRL2O00421 344 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 PCDH17O14917 1159 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 CPMP14384 443 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 PSMD7P51665 324 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 GPR143P51810 404 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 RPS15P62841 145 aaKnown RBP16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 PYCR3Q53H96 274 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 COX20Q5RI15 118 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 CARD17Q5XLA6 110 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 OR7D2Q96RA2 312 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 VDAC3Q9Y277 283 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 PCDHGA8Q9Y5G5 932 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 PRAMEF33A0A0G2JMD5 474 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 A0A1W2PRQ8 180 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 KRBA1A5PL33 1030 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 MT-ND5P03915 603 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 OPN1LWP04000 364 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 PGCP20142 388 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 BCL6P41182 706 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 DPP6P42658 865 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 ZNF404Q494X3 552 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 RAET1LQ5VY80 246 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 CBLL1Q75N03 491 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 RBM12BQ8IXT5 1001 aaKnown RBP16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 ADAMTS16Q8TE57 1224 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 ZNF707Q96C28 371 aaPredicted RBP16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 CCDC115Q96NT0 180 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 WNK3Q9BYP7 1800 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 ARFGEF1Q9Y6D6 1849 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 C4BPBP20851 252 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 B4GALNT1Q00973 533 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 SNTA1Q13424 505 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 LEXMQ3ZCV2 418 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 SLC44A3Q8N4M1 653 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 DEFB123Q8N688 67 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 OR5L2Q8NGL0 311 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 SLC38A5Q8WUX1 472 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 COQ10AQ96MF6 247 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 RNF121Q9H920 327 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 A0A1B0GW55 424 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 GXYLT2A0PJZ3 443 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 PLPP1O14494 284 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 AREL1O15033 823 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 SEC14L5O43304 696 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 CCNKO75909 580 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 TSPAN12O95859 305 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 DUX4L2P0CJ85 424 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 DUX4L3P0CJ86 424 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 DUX4L4P0CJ87 422 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 DUX4L5P0CJ88 424 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 DUX4L6P0CJ89 424 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 DUX4L7P0CJ90 424 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 MYF6P23409 242 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 CLCA4Q14CN2 919 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 MAPK14Q16539 360 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 RAB43Q86YS6 212 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 MMP21Q8N119 569 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 DUX4Q9UBX2 424 aa16.91■□□□□ 0.3
PTPDC1-202ENST00000375360 H3BML4 177 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 OLFM2O95897 454 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 ECDO95905 644 aaPredicted RBP16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 LCKP06239 509 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 DCKP27707 260 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 DTX3Q8N9I9 347 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 RSC1A1Q92681 617 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 EID2BQ96D98 161 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 LGALS12Q96DT0 336 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms