RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 KCNC1P48547 511 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 SPINT3P49223 89 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 SNTB2Q13425 540 aaKnown RBP13.59□□□□□ -0.23
TRAF1-201ENST00000373887 CATSPEREQ5SY80 951 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 SIGLEC10Q96LC7 697 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 CCNL2Q96S94 520 aaPredicted RBP13.59□□□□□ -0.23
TRAF1-201ENST00000373887 SLC2A11Q9BYW1 496 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 VRTNQ9H8Y1 702 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 OR5K4A6NMS3 321 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 YY2O15391 372 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 PRKAR1BP31321 381 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 SOX3P41225 446 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 ARSDP51689 593 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 SIM1P81133 766 aaPredicted RBP13.59□□□□□ -0.23
TRAF1-201ENST00000373887 HTD2P86397 168 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 APOFQ13790 326 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 LEG1Q6P5S2 330 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 MRPL43Q8N983 215 aaKnown RBP13.59□□□□□ -0.23
TRAF1-201ENST00000373887 CNN2Q99439 309 aaKnown RBP13.59□□□□□ -0.23
TRAF1-201ENST00000373887 MVB12BQ9H7P6 319 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 KCNK12Q9HB15 430 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 KLHL9Q9P2J3 617 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 PRODH2Q9UF12 536 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 CD1DP15813 335 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 NKX6-1P78426 367 aaPredicted RBP13.59□□□□□ -0.23
TRAF1-201ENST00000373887 ATP6AP1Q15904 470 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 MARCH8Q5T0T0 291 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 DCUN1D4Q92564 292 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 ATOH1Q92858 354 aaPredicted RBP13.59□□□□□ -0.23
TRAF1-201ENST00000373887 FAM46AQ96IP4 442 aaKnown RBP13.59□□□□□ -0.23
TRAF1-201ENST00000373887 METTL2AQ96IZ6 378 aaKnown RBP13.59□□□□□ -0.23
TRAF1-201ENST00000373887 ZNF778Q96MU6 729 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 SLC46A2Q9BY10 475 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 ABCG5Q9H222 651 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 ANKRD33BA6NCL7 494 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 C1orf196B1AJZ1 125 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 ANKRD28O15084 1053 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 HTR3BO95264 441 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 UCHL1P09936 223 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 DRD5P21918 477 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 ACTC1P68032 377 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 ACTA1P68133 377 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 GTPBP8Q8N3Z3 284 aaPredicted RBP13.59□□□□□ -0.23
TRAF1-201ENST00000373887 IL17RCQ8NAC3 791 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 MOAP1Q96BY2 351 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 OR2B2Q9GZK3 357 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 STUB1Q9UNE7 303 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 C5P01031 1676 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 POLR1CO15160 346 aaPredicted RBP13.58□□□□□ -0.23
TRAF1-201ENST00000373887 RAD1O60671 282 aa13.58□□□□□ -0.23
TRAF1-201ENST00000373887 EDN1P05305 212 aa13.58□□□□□ -0.23
TRAF1-201ENST00000373887 ART1P52961 327 aa13.58□□□□□ -0.23
TRAF1-201ENST00000373887 DCST2Q5T1A1 773 aa13.58□□□□□ -0.23
TRAF1-201ENST00000373887 GPR137CQ8N3F9 429 aa13.58□□□□□ -0.23
TRAF1-201ENST00000373887 OR52P1PQ8NH57 321 aa13.58□□□□□ -0.23
TRAF1-201ENST00000373887 ZNF681Q96N22 645 aa13.58□□□□□ -0.23
TRAF1-201ENST00000373887 OR51B6Q9H340 312 aa13.58□□□□□ -0.23
TRAF1-201ENST00000373887 RPS10P5Q9NQ39 176 aa13.58□□□□□ -0.23
TRAF1-201ENST00000373887 CENPBD1B2RD01 187 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 PITPNBP48739 271 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 CAV2P51636 162 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 TLE3Q04726 772 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 TCEAL8Q8IYN2 117 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 LRRC46Q96FV0 321 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 C19orf12Q9NSK7 152 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 KCNC3Q14003 757 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 FIGLAQ6QHK4 219 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 SCD5Q86SK9 330 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 OR5AR1Q8NGP9 310 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 DIO2Q92813 273 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 OR4K3Q96R72 315 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 MACROD1Q9BQ69 325 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 DOHHQ9BU89 302 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 TMEM225BP0DP42 221 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 GRB7Q14451 532 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 PTCRAQ6ISU1 281 aaPredicted RBP13.58□□□□□ -0.24
TRAF1-201ENST00000373887 OR51T1Q8NGJ9 327 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 B3GNT2Q9NY97 397 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 C5AR2Q9P296 337 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 PCDHGA2Q9Y5H1 932 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 NUMBLQ9Y6R0 609 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 SH3PXD2BA1X283 911 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 NPIPB15A6NHN6 443 aaPredicted RBP13.58□□□□□ -0.24
TRAF1-201ENST00000373887 GMDSO60547 372 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 CDK2P24941 298 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 CSNK2A1P68400 391 aaPredicted RBP13.58□□□□□ -0.24
TRAF1-201ENST00000373887 CSNK2A3Q8NEV1 391 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 TOMM40LQ969M1 308 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 SAT2Q96F10 170 aaPredicted RBP13.58□□□□□ -0.24
TRAF1-201ENST00000373887 CLSTN3Q9BQT9 956 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 GPATCH2Q9NW75 528 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 ADAMTS5Q9UNA0 930 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 GPR52Q9Y2T5 361 aa13.58□□□□□ -0.24
TRAF1-201ENST00000373887 ARPC4-TTLL3A0A0A6YYG9 625 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 NDUFV2P19404 249 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 DSC1Q08554 894 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 ANKRD54Q6NXT1 300 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 SCML4Q8N228 414 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 ZNF689Q96CS4 500 aaPredicted RBP13.57□□□□□ -0.24
TRAF1-201ENST00000373887 CNTNAP3BQ96NU0 1288 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms