RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 PROM1O43490 865 aa16.64■□□□□ 0.25
TRAF3IP1-201ENST00000373327 FCMRO60667 390 aa16.64■□□□□ 0.25
TRAF3IP1-201ENST00000373327 ZNF45Q02386 682 aa16.64■□□□□ 0.25
TRAF3IP1-201ENST00000373327 TMEM240Q5SV17 173 aa16.64■□□□□ 0.25
TRAF3IP1-201ENST00000373327 C11orf88Q6PI97 169 aa16.64■□□□□ 0.25
TRAF3IP1-201ENST00000373327 OR2L5Q8NG80 312 aa16.64■□□□□ 0.25
TRAF3IP1-201ENST00000373327 C7orf34Q96L11 122 aa16.64■□□□□ 0.25
TRAF3IP1-201ENST00000373327 DDX31Q9H8H2 851 aaKnown RBP16.64■□□□□ 0.25
TRAF3IP1-201ENST00000373327 MRPL39Q9NYK5 338 aaKnown RBP16.64■□□□□ 0.25
TRAF3IP1-201ENST00000373327 MED31Q9Y3C7 131 aa16.64■□□□□ 0.25
TRAF3IP1-201ENST00000373327 HEBP2Q9Y5Z4 205 aa16.64■□□□□ 0.25
TRAF3IP1-201ENST00000373327 UNC13CQ8NB66 2214 aa16.64■□□□□ 0.25
TRAF3IP1-201ENST00000373327 A0A1W2PS29 197 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 CPNE3O75131 537 aaKnown RBP16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 SOX2P48431 317 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 LIM2P55344 173 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 UBXN2BQ14CS0 331 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 SEC23BQ15437 767 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 HYAL4Q2M3T9 481 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 PARM1Q6UWI2 310 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 OR2T33Q8NG76 320 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 OR4K13Q8NH42 304 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 SMAP2Q8WU79 429 aaPredicted RBP16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 COQ10AQ96MF6 247 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 ASB16Q96NS5 453 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 SLAMF7Q9NQ25 335 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 MRPL15Q9P015 296 aaKnown RBP16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 HCN2Q9UL51 889 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 PTPRZ1P23471 2315 aaPredicted RBP16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 ZNF236Q9UL36 1845 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 C12orf71A8MTZ7 269 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 MMP11P24347 488 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 CRYZQ08257 329 aaKnown RBP16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 E2F2Q14209 437 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 IRAK1BP1Q5VVH5 260 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 TCTN3Q6NUS6 607 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 NCCRP1Q6ZVX7 275 aaPredicted RBP16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 LACC1Q8IV20 430 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 FBXL6Q8N531 539 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 NLGN4YQ8NFZ3 816 aaPredicted RBP16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 CHPT1Q8WUD6 406 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 SLC41A3Q96GZ6 507 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 BOLA1Q9Y3E2 137 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 AHCTF1Q8WYP5 2266 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 DOCK4Q8N1I0 1966 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 TRAV27A0A087WT01 109 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 OR2W5A6NFC9 320 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 RDH16O75452 317 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 SLC46A3Q7Z3Q1 461 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 CADM3Q8N126 398 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 GNPDA2Q8TDQ7 276 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 MMABQ96EY8 250 aaPredicted RBP16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 ERMAPQ96PL5 475 aaPredicted RBP16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 ALOXE3Q9BYJ1 711 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 ZNF226Q9NYT6 803 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 NLKQ9UBE8 527 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 RALGAPA2Q2PPJ7 1873 aa16.63■□□□□ 0.25
TRAF3IP1-201ENST00000373327 HMGN4O00479 90 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 CLDN4O14493 209 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 LRRTM2O43300 516 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 ACVR2AP27037 513 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 ACSL1P33121 698 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 PBX2P40425 430 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 CAPZA2P47755 286 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 RPA4Q13156 261 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 RPE65Q16518 533 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 ACSM5Q6NUN0 579 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 ZNF544Q6NX49 715 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 FBXO46Q6PJ61 603 aaPredicted RBP16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 CHMP1BQ7LBR1 199 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 PELI2Q9HAT8 420 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 PIAS3Q9Y6X2 628 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 ZC3H12DA2A288 527 aaKnown RBP16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 HMGN1P05114 100 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 ATP5A1P25705 553 aaKnown RBP16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 ZNF33BQ06732 778 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 GXYLT1Q4G148 440 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 NRARPQ7Z6K4 114 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 PHOSPHO1Q8TCT1 267 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 ZG16BQ96DA0 208 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 CHIAQ9BZP6 476 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 GNG8Q9UK08 70 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 STUB1Q9UNE7 303 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 A0A1W2PR48 441 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 SMAD9O15198 467 aaKnown RBP16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 HLA-DPB1P04440 258 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 XCR1P46094 333 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 TUBA3EQ6PEY2 450 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 NATD1Q8N6N6 113 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 CSNK1A1LQ8N752 337 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 OR5T3Q8NGG3 340 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 OR52A5Q9H2C5 316 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 EXTL2Q9UBQ6 330 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 POLR1DQ9Y2S0 133 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 KCNE3Q9Y6H6 103 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 DSG2Q14126 1118 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 ENTPD8Q5MY95 495 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 SLC16A12Q6ZSM3 486 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 USP53Q70EK8 1073 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 Q8N402 240 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms