RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 CBR1P16152 277 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 PFKLP17858 780 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 C5AR1P21730 350 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 CLCN7P51798 805 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 GABARAPL2P60520 117 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 Q3ZCU0 254 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 RNASE10Q5GAN6 216 aaKnown RBP13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 LACC1Q8IV20 430 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 OR7G3Q8NG95 312 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 SPIN2AQ99865 258 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 SPIN2BQ9BPZ2 258 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 KLHL9Q9P2J3 617 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 FTSJ1Q9UET6 329 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 LSM5Q9Y4Y9 91 aaKnown RBP13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 M0QZQ0 153 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 HAS3O00219 553 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 C7P10643 843 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 CXCR1P25024 350 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 ATP5A1P25705 553 aaKnown RBP13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 TMEM198Q66K66 360 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 PTCRAQ6ISU1 281 aaPredicted RBP13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 IL22RA1Q8N6P7 574 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 MRPL43Q8N983 215 aaKnown RBP13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 OR13C3Q8NGS6 347 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 NANPQ8TBE9 248 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 HBEGFQ99075 208 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 TCRBV7S3A2A0A539 114 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 SAP18O00422 153 aaKnown RBP13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 CBSLP0DN79 551 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 CBSP35520 551 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 REEP5Q00765 189 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 NFATC3Q12968 1075 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 SLBPQ14493 270 aaKnown RBP eCLIP13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 IGSF11Q5DX21 431 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 PXDC1Q5TGL8 231 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 SLC30A7Q8NEW0 376 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 PINK1Q9BXM7 581 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 HCFC1R1Q9NWW0 138 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 AOC1P19801 751 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 THBS3P49746 956 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 CLEC9AQ6UXN8 241 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 COX18Q8N8Q8 333 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 SLC35B2Q8TB61 432 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 OR51I1Q9H343 314 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 IL21RQ9HBE5 538 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 MS4A12Q9NXJ0 267 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 SLC17A6Q9P2U8 582 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 APOBEC3BQ9UH17 382 aaKnown RBP13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 PUS1Q9Y606 427 aaKnown RBP eCLIP13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 DUX1O43812 170 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 SNCGO76070 127 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 EPOP01588 193 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 ARAFP10398 606 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 ELK4P28324 431 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 HSF1Q00613 529 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 GALNT2Q10471 571 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 STEAP4Q687X5 459 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 MBOAT1Q6ZNC8 495 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 SORCS1Q8WY21 1168 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 CDC6Q99741 560 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 URM1Q9BTM9 101 aaKnown RBP13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 MED6O75586 246 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 PLGP00747 810 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 PPP3CBP16298 524 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 TREML1Q86YW5 311 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 DNAJC22Q8N4W6 341 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 CMASQ8NFW8 434 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 THEM6Q8WUY1 208 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 RALYQ9UKM9 306 aaKnown RBP13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 PLAGL1Q9UM63 463 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 FAM159BA6NKW6 160 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 LEPRP48357 1165 aaKnown RBP13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 PTH2RP49190 550 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 CAV2P51636 162 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 SGCBQ16585 318 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 ASRGL1Q7L266 308 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 CPNE8Q86YQ8 564 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 TMEM156Q8N614 296 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 SLAMF9Q96A28 289 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 TSSK6Q9BXA6 273 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 N4BP2Q86UW6 1770 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 FOXD2O60548 495 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 SULT1C4O75897 302 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 C1orf61Q13536 156 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 FXNQ16595 210 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 YIF1BQ5BJH7 314 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 AGAP6Q5VW22 663 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 C6orf89Q6UWU4 347 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 DEFB123Q8N688 67 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 LINC01599Q8WXQ3 324 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 C14orf79Q96F83 325 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 AGAP4Q96P64 663 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 OR7D2Q96RA2 312 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 OR52B2Q96RD2 323 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 XYLT2Q9H1B5 865 aa13.36□□□□□ -0.27
RAPGEF1-202ENST00000372190 MYH3P11055 1940 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 METTL15P1P0C7V9 234 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 CXCL12P48061 93 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 SF3A2Q15428 464 aaKnown RBP13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 EPGNQ6UW88 154 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms