RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 MANEALQ5VSG8 457 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 BAIAP2L2Q6UXY1 529 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 ZNF767PQ75MW2 155 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 GID4Q8IVV7 300 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 OR5P2Q8WZ92 322 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 RADILQ96JH8 1075 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 ZNF416Q9BWM5 594 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 SCP2D1Q9UJQ7 156 aa12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 AK6Q9Y3D8 172 aaKnown RBP12.66□□□□□ -0.38
RAPGEF1-201ENST00000372189 LCMT2O60294 686 aaKnown RBP12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 RAD51DO75771 328 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 MT-ND2P03891 347 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 UCHL1P09936 223 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 ARSDP51689 593 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 TRAM2Q15035 370 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 CATSPEREQ5SY80 951 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 OR4C11Q6IEV9 310 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 CCBE1Q6UXH8 406 aaPredicted RBP12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 CYS1Q717R9 158 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 TMEM135Q86UB9 458 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 ZNF761Q86XN6 746 aaPredicted RBP12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 SLC44A3Q8N4M1 653 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 SMOXQ9NWM0 555 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 ATE1O95260 518 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 IL3P08700 152 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 GALEQ14376 348 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 ZFP82Q8N141 532 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 CCDC54Q8NEL0 328 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 ST7LQ8TDW4 575 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 LRRC46Q96FV0 321 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 QRSL1Q9H0R6 528 aaKnown RBP12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 PAQR5Q9NXK6 330 aaPredicted RBP12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 TCHHQ07283 1943 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 MDFIC2A0A1B0GVS7 189 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 SMIM30A4D0T7 59 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 PROM1O43490 865 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 HTR1AP08908 422 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 HSD11B1P28845 292 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 GABRA3P34903 492 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 CDHR3Q6ZTQ4 885 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 MALSU1Q96EH3 234 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 TTYH2Q9BSA4 534 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 FUNDC2Q9BWH2 189 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 MKRN2Q9H000 416 aaKnown RBP12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 SLA2Q9H6Q3 261 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 MARCH5Q9NX47 278 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 USP3Q9Y6I4 520 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 C13orf42A0A1B0GVH6 325 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 SNNO75324 88 aaPredicted RBP12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 TIA1P31483 386 aaKnown RBP eCLIP12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 SLC6A6P31641 620 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 ACY1Q03154 408 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 PLCXD2Q0VAA5 305 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 MAJINQ3KP22 176 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 TANGO2Q6ICL3 276 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 ZSWIM9Q86XI8 627 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 OR4K1Q8NGD4 311 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.65□□□□□ -0.381e-8■■■■■ 33.8
RAPGEF1-201ENST00000372189 SH3YL1Q96HL8 342 aaPredicted RBP12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 SEC61A2Q9H9S3 476 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 AIG1Q9NVV5 245 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 PCDHGA5Q9Y5G8 931 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 STRCQ7RTU9 1775 aa12.65□□□□□ -0.38
RAPGEF1-201ENST00000372189 A8MVJ9 347 aa12.65□□□□□ -0.39
RAPGEF1-201ENST00000372189 FAAHO00519 579 aa12.65□□□□□ -0.39
RAPGEF1-201ENST00000372189 MAGEB4O15481 346 aaPredicted RBP12.65□□□□□ -0.39
RAPGEF1-201ENST00000372189 POU2F2P09086 479 aa12.65□□□□□ -0.39
RAPGEF1-201ENST00000372189 OTX2P32243 289 aa12.65□□□□□ -0.39
RAPGEF1-201ENST00000372189 SLC6A9P48067 706 aa12.65□□□□□ -0.39
RAPGEF1-201ENST00000372189 CLDN2P57739 230 aa12.65□□□□□ -0.39
RAPGEF1-201ENST00000372189 NFATC3Q12968 1075 aa12.65□□□□□ -0.39
RAPGEF1-201ENST00000372189 Q8N402 240 aa12.65□□□□□ -0.39
RAPGEF1-201ENST00000372189 OR5L2Q8NGL0 311 aa12.65□□□□□ -0.39
RAPGEF1-201ENST00000372189 ZNF596Q8TC21 504 aa12.65□□□□□ -0.39
RAPGEF1-201ENST00000372189 OR14A2Q96R54 314 aa12.65□□□□□ -0.39
RAPGEF1-201ENST00000372189 F2RL3Q96RI0 385 aa12.65□□□□□ -0.39
RAPGEF1-201ENST00000372189 DOHHQ9BU89 302 aa12.65□□□□□ -0.39
RAPGEF1-201ENST00000372189 DUSP23Q9BVJ7 150 aa12.65□□□□□ -0.39
RAPGEF1-201ENST00000372189 BOCQ9BWV1 1114 aa12.65□□□□□ -0.39
RAPGEF1-201ENST00000372189 ACTR6Q9GZN1 396 aa12.65□□□□□ -0.39
RAPGEF1-201ENST00000372189 RHCGQ9UBD6 479 aa12.65□□□□□ -0.39
RAPGEF1-201ENST00000372189 ZNF878C9JN71 531 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 STK17BO94768 372 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 SCGB1D2O95969 90 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 LCKP06239 509 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 HOXD8P13378 290 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 CAMK2DQ13557 499 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 GRB7Q14451 532 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 PNCKQ6P2M8 343 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 CBARPQ8N350 705 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 LRRC25Q8N386 305 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 SAMD12Q8N8I0 201 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 THAP3Q8WTV1 239 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 TMEM234Q8WY98 164 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 MAELQ96JY0 434 aaKnown RBP12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 KIAA0513O60268 411 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 PTTG1O95997 202 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 PPP5CP53041 499 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 GRIK2Q13002 908 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms