RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 IFNEQ86WN2 208 aa11.92□□□□□ -0.5
RPF1-201ENST00000370654 KRTAP1-3Q8IUG1 177 aa11.92□□□□□ -0.5
RPF1-201ENST00000370654 SLC44A2Q8IWA5 706 aaPredicted RBP11.92□□□□□ -0.5
RPF1-201ENST00000370654 WFDC11Q8NEX6 87 aa11.92□□□□□ -0.5
RPF1-201ENST00000370654 OR5M1Q8NGP8 315 aa11.92□□□□□ -0.5
RPF1-201ENST00000370654 TMCO6Q96DC7 493 aa11.92□□□□□ -0.5
RPF1-201ENST00000370654 MTBPQ96DY7 904 aa11.92□□□□□ -0.5
RPF1-201ENST00000370654 L3HYPDHQ96EM0 354 aa11.92□□□□□ -0.5
RPF1-201ENST00000370654 UCN2Q96RP3 112 aa11.92□□□□□ -0.5
RPF1-201ENST00000370654 C12orf65Q9H3J6 166 aaKnown RBP11.92□□□□□ -0.5
RPF1-201ENST00000370654 NMRK1Q9NWW6 199 aa11.92□□□□□ -0.5
RPF1-201ENST00000370654 MYO1GB0I1T2 1018 aa11.91□□□□□ -0.5
RPF1-201ENST00000370654 G3V2L1 256 aa11.91□□□□□ -0.5
RPF1-201ENST00000370654 SIAH2O43255 324 aa11.91□□□□□ -0.5
RPF1-201ENST00000370654 SCO2O43819 266 aa11.91□□□□□ -0.5
RPF1-201ENST00000370654 PLOD3O60568 738 aa11.91□□□□□ -0.5
RPF1-201ENST00000370654 JUNP05412 331 aaKnown RBP11.91□□□□□ -0.5
RPF1-201ENST00000370654 ABHD2P08910 425 aa11.91□□□□□ -0.5
RPF1-201ENST00000370654 PYGBP11216 843 aa11.91□□□□□ -0.5
RPF1-201ENST00000370654 TAC1P20366 129 aa11.91□□□□□ -0.5
RPF1-201ENST00000370654 PEX19P40855 299 aa11.91□□□□□ -0.5
RPF1-201ENST00000370654 MC3RP41968 323 aa11.91□□□□□ -0.5
RPF1-201ENST00000370654 SUCLG1P53597 346 aaKnown RBP11.91□□□□□ -0.5
RPF1-201ENST00000370654 ACSM2AQ08AH3 577 aa11.91□□□□□ -0.5
RPF1-201ENST00000370654 SF3B4Q15427 424 aaKnown RBP eCLIP11.91□□□□□ -0.5
RPF1-201ENST00000370654 ACSM2BQ68CK6 577 aa11.91□□□□□ -0.5
RPF1-201ENST00000370654 GALNT18Q6P9A2 607 aa11.91□□□□□ -0.5
RPF1-201ENST00000370654 KIF18BQ86Y91 864 aa11.91□□□□□ -0.5
RPF1-201ENST00000370654 CDC26Q8NHZ8 85 aa11.91□□□□□ -0.5
RPF1-201ENST00000370654 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.91□□□□□ -0.5
RPF1-201ENST00000370654 WNT2BQ93097 391 aa11.91□□□□□ -0.5
RPF1-201ENST00000370654 SFXN2Q96NB2 322 aa11.91□□□□□ -0.5
RPF1-201ENST00000370654 SMR3AQ99954 134 aa11.91□□□□□ -0.5
RPF1-201ENST00000370654 TXLNGYQ9BZA5 131 aa11.91□□□□□ -0.5
RPF1-201ENST00000370654 TSPYL1Q9H0U9 437 aa11.91□□□□□ -0.5
RPF1-201ENST00000370654 DSN1Q9H410 356 aa11.91□□□□□ -0.5
RPF1-201ENST00000370654 MAP1AP78559 2803 aaPredicted RBP11.9□□□□□ -0.5
RPF1-201ENST00000370654 A0A1W2PNV4 684 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 HCRTR2O43614 444 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 FADS1O60427 444 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 RAF1P04049 648 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 ANXA4P09525 319 aaPredicted RBP11.9□□□□□ -0.5
RPF1-201ENST00000370654 DPP4P27487 766 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 SORDQ00796 357 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 FAM27E3Q08E93 113 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 C2orf80Q0P641 193 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 LCP2Q13094 533 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 GAB1Q13480 694 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 DEFB113Q30KQ7 82 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 SPIN4Q56A73 249 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 SH2D4BQ5SQS7 431 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 FAM71E1Q6IPT2 247 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 VWA1Q6PCB0 445 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 ENPP6Q6UWR7 440 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 TMEM107Q6UX40 140 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 SH2D5Q6ZV89 423 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 GSPT2Q8IYD1 628 aaKnown RBP11.9□□□□□ -0.5
RPF1-201ENST00000370654 FAM9CQ8IZT9 166 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 CCNYL1Q8N7R7 359 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 GBP7Q8N8V2 638 aaPredicted RBP11.9□□□□□ -0.5
RPF1-201ENST00000370654 FADS6Q8N9I5 356 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 LRRN4CLQ8ND94 238 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 CHDHQ8NE62 594 aaPredicted RBP11.9□□□□□ -0.5
RPF1-201ENST00000370654 OR2M3Q8NG83 312 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 FIG4Q92562 907 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 MBD6Q96DN6 1003 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 LRRC46Q96FV0 321 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 ALPK1Q96QP1 1244 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 SFXN3Q9BWM7 321 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 GLIPR2Q9H4G4 154 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 MID1IP1Q9NPA3 183 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 SIRT5Q9NXA8 310 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 MED11Q9P086 117 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 TBK1Q9UHD2 729 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 DKKL1Q9UK85 242 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 POLR3HQ9Y535 204 aaPredicted RBP11.9□□□□□ -0.5
RPF1-201ENST00000370654 PTGDR2Q9Y5Y4 395 aa11.9□□□□□ -0.5
RPF1-201ENST00000370654 SERTM1A2A2V5 107 aa11.89□□□□□ -0.51
RPF1-201ENST00000370654 SH3D21A4FU49 640 aa11.89□□□□□ -0.51
RPF1-201ENST00000370654 A8MXE2 369 aa11.89□□□□□ -0.51
RPF1-201ENST00000370654 SHISA8B8ZZ34 492 aa11.89□□□□□ -0.51
RPF1-201ENST00000370654 UPK1AO00322 258 aa11.89□□□□□ -0.51
RPF1-201ENST00000370654 BCAS2O75934 225 aaPredicted RBP11.89□□□□□ -0.51
RPF1-201ENST00000370654 PSMG1O95456 288 aa11.89□□□□□ -0.51
RPF1-201ENST00000370654 IGKV1D-16P01601 117 aa11.89□□□□□ -0.51
RPF1-201ENST00000370654 ENO1P06733 434 aaKnown RBP11.89□□□□□ -0.51
RPF1-201ENST00000370654 CD53P19397 219 aa11.89□□□□□ -0.51
RPF1-201ENST00000370654 DDCP20711 480 aa11.89□□□□□ -0.51
RPF1-201ENST00000370654 IL12BP29460 328 aa11.89□□□□□ -0.51
RPF1-201ENST00000370654 EVI2BP34910 448 aa11.89□□□□□ -0.51
RPF1-201ENST00000370654 NCBP2P52298 156 aaKnown RBP eCLIP11.89□□□□□ -0.51
RPF1-201ENST00000370654 PNLIPRP2P54317 469 aa11.89□□□□□ -0.51
RPF1-201ENST00000370654 ZNF155Q12901 538 aaPredicted RBP11.89□□□□□ -0.51
RPF1-201ENST00000370654 STX5Q13190 355 aa11.89□□□□□ -0.51
RPF1-201ENST00000370654 EFR3AQ14156 821 aa11.89□□□□□ -0.51
RPF1-201ENST00000370654 SLC29A2Q14542 456 aa11.89□□□□□ -0.51
RPF1-201ENST00000370654 ERCC6LQ2NKX8 1250 aa11.89□□□□□ -0.51
RPF1-201ENST00000370654 GLE1Q53GS7 698 aaKnown RBP11.89□□□□□ -0.51
RPF1-201ENST00000370654 SPDYAQ5MJ70 313 aa11.89□□□□□ -0.51
RPF1-201ENST00000370654 FBXW10Q5XX13 1052 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms