RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 WIF1Q9Y5W5 379 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 CCDC168Q8NDH2 2452 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 OR6C70A6NIJ9 312 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 TRIM49D1C9J1S8 452 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 PCDH7O60245 1069 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 TSPAN2O60636 221 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 BCAS2O75934 225 aaPredicted RBP9.37□□□□□ -0.91
CLRN3-201ENST00000368671 SUPT7LO94864 414 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 TGM6O95932 706 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 IL3P08700 152 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 COL6A2P12110 1019 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 CHN1P15882 459 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 ZNF708P17019 499 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 CHMP24386 653 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 GRK2P25098 689 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 HOXC12P31275 282 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 SERPINB9P50453 376 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 CLDN18P56856 261 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 CORO7P57737 925 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 ETF1P62495 437 aaKnown RBP9.37□□□□□ -0.91
CLRN3-201ENST00000368671 NKX6-1P78426 367 aaPredicted RBP9.37□□□□□ -0.91
CLRN3-201ENST00000368671 LTBQ06643 244 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 CKAP4Q07065 602 aaKnown RBP9.37□□□□□ -0.91
CLRN3-201ENST00000368671 GAB1Q13480 694 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 ERCC6LQ2NKX8 1250 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 SCIMPQ6UWF3 145 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 NPSR1Q6W5P4 371 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 ZNF572Q7Z3I7 529 aaPredicted RBP9.37□□□□□ -0.91
CLRN3-201ENST00000368671 ADGRE4PQ86SQ3 457 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 BIVMQ86UB2 503 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 UBQLNLQ8IYU4 475 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 CDYL2Q8N8U2 506 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 ZNF675Q8TD23 568 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 EFHD2Q96C19 240 aaPredicted RBP9.37□□□□□ -0.91
CLRN3-201ENST00000368671 DTNBP1Q96EV8 351 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 SLC35A4Q96G79 324 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 C18orf12Q96KH6 178 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 MRPL57Q9BQC6 102 aaKnown RBP9.37□□□□□ -0.91
CLRN3-201ENST00000368671 FOLH1BQ9HBA9 442 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 BEX4Q9NWD9 120 aaPredicted RBP9.37□□□□□ -0.91
CLRN3-201ENST00000368671 C6orf203Q9P0P8 240 aaPredicted RBP9.37□□□□□ -0.91
CLRN3-201ENST00000368671 SENP1Q9P0U3 644 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 VPS29Q9UBQ0 182 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 NDRG3Q9UGV2 375 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 MCM8Q9UJA3 840 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 ZNF225Q9UK10 706 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 PACSIN3Q9UKS6 424 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 DLGAP4Q9Y2H0 992 aa9.37□□□□□ -0.91
CLRN3-201ENST00000368671 A0A1W2PNV4 684 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 GNG14A0A1W2PPG7 69 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 C17orf51A8MQB3 221 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 A8MXE2 369 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 MANBAO00462 879 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 HCRTR2O43614 444 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 SCO2O43819 266 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 KRT6AP02538 564 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 KRT6BP04259 564 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 INHBBP09529 407 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 SBK3P0C264 359 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 CT45A8P0DMV1 189 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 CT45A9P0DMV2 189 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 DPP4P27487 766 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 HMOX2P30519 316 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 HSD17B3P37058 310 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 KRT6CP48668 564 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 EEF1A1P68104 462 aaKnown RBP9.36□□□□□ -0.91
CLRN3-201ENST00000368671 SIRPAP78324 504 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 CLCQ05315 142 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 FAM27E3Q08E93 113 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 CSTF3Q12996 717 aaKnown RBP9.36□□□□□ -0.91
CLRN3-201ENST00000368671 EFR3AQ14156 821 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 CT45A2Q5DJT8 189 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 SH2D4BQ5SQS7 431 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 EEF1A1P5Q5VTE0 462 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 VWA1Q6PCB0 445 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 LARP4Q71RC2 724 aaKnown RBP eCLIP9.36□□□□□ -0.91
CLRN3-201ENST00000368671 CHMP1BQ7LBR1 199 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 KRTAP1-3Q8IUG1 177 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 SLC44A2Q8IWA5 706 aaPredicted RBP9.36□□□□□ -0.91
CLRN3-201ENST00000368671 FAM9CQ8IZT9 166 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 CNEP1R1Q8N9A8 125 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 OR4K17Q8NGC6 315 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 OR4N2Q8NGD1 307 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 DCAKDQ8WVC6 231 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 SMPDL3BQ92485 455 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 MTBPQ96DY7 904 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 FAM111AQ96PZ2 611 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 BTBD9Q96Q07 612 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 EBPLQ9BY08 206 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 FUT8Q9BYC5 575 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 GIMAP4Q9NUV9 329 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 KLHL28Q9NXS3 571 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 PPP4R1LQ9P1A2 415 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 OR10H1Q9Y4A9 318 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 TESMINQ9Y4I5 508 aa9.36□□□□□ -0.91
CLRN3-201ENST00000368671 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 B4DXG7 233 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 TNFSF13O75888 250 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 HSD3B1P14060 373 aa9.35□□□□□ -0.91
CLRN3-201ENST00000368671 HK1P19367 917 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms