RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 RGS17Q9UGC6 210 aaPredicted RBP11.03□□□□□ -0.64
COPA-202ENST00000368069 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.03□□□□□ -0.64
COPA-202ENST00000368069 A0A1W2PQ09 198 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 TMEM202A6NGA9 273 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 TSPAN4O14817 238 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 CPNE6O95741 557 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 LDOC1O95751 146 aaPredicted RBP11.03□□□□□ -0.64
COPA-202ENST00000368069 ANXA3P12429 323 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 GP1BBP13224 206 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 POU4F2Q12837 409 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 GAB1Q13480 694 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 ZNF542PQ5EBM4 170 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 PIP5KL1Q5T9C9 394 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 SLC46A3Q7Z3Q1 461 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 RIMKLAQ8IXN7 391 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 SYT14Q8NB59 555 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 OR52E1Q8NGJ3 308 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 OR2AJ1Q8NGZ0 328 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 RPLP0P6Q8NHW5 317 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 LMX1AQ8TE12 382 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 THAP4Q8WY91 577 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 DNAJA3Q96EY1 480 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 CNN2Q99439 309 aaKnown RBP11.03□□□□□ -0.64
COPA-202ENST00000368069 CXorf36Q9H7Y0 433 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 DOCK5Q9H7D0 1870 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 TRIP11Q15643 1979 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 OR14I1A6ND48 311 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 FUCA1P04066 466 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 LIPAP38571 399 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 GPR143P51810 404 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 PSMA6P60900 246 aaKnown RBP11.03□□□□□ -0.64
COPA-202ENST00000368069 MBTPS1Q14703 1052 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 UBXN2BQ14CS0 331 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 TCEAL5Q5H9L2 206 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 ALG10BQ5I7T1 473 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 ALG1LQ6GMV1 187 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 TMED4Q7Z7H5 227 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 ARMC10Q8N2F6 343 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 SPRYD4Q8WW59 207 aaPredicted RBP11.03□□□□□ -0.64
COPA-202ENST00000368069 FCAMRQ8WWV6 532 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 COQ8BQ96D53 544 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 ZNF559Q9BR84 538 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 THSD1Q9NS62 852 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 HCN3Q9P1Z3 774 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 DNMT3BQ9UBC3 853 aaKnown RBP11.03□□□□□ -0.64
COPA-202ENST00000368069 MCM3APO60318 1980 aa11.03□□□□□ -0.64
COPA-202ENST00000368069 C11orf98E9PRG8 122 aa11.02□□□□□ -0.64
COPA-202ENST00000368069 SMAD9O15198 467 aaKnown RBP11.02□□□□□ -0.64
COPA-202ENST00000368069 PPM1BO75688 479 aa11.02□□□□□ -0.64
COPA-202ENST00000368069 GIPRP48546 466 aa11.02□□□□□ -0.64
COPA-202ENST00000368069 GNG2P59768 71 aa11.02□□□□□ -0.64
COPA-202ENST00000368069 PRKCDQ05655 676 aa11.02□□□□□ -0.64
COPA-202ENST00000368069 GAS6Q14393 721 aa11.02□□□□□ -0.64
COPA-202ENST00000368069 BCL7AQ4VC05 210 aa11.02□□□□□ -0.64
COPA-202ENST00000368069 OR51L1Q8NGJ5 315 aa11.02□□□□□ -0.64
COPA-202ENST00000368069 SETD6Q8TBK2 473 aa11.02□□□□□ -0.64
COPA-202ENST00000368069 WDR20Q8TBZ3 569 aa11.02□□□□□ -0.64
COPA-202ENST00000368069 CHTF18Q8WVB6 975 aa11.02□□□□□ -0.64
COPA-202ENST00000368069 EXO5Q9H790 373 aa11.02□□□□□ -0.64
COPA-202ENST00000368069 MAU2Q9Y6X3 613 aa11.02□□□□□ -0.64
COPA-202ENST00000368069 PPP1R3DO95685 299 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 RNH1P13489 461 aaKnown RBP11.02□□□□□ -0.65
COPA-202ENST00000368069 ZNF20P17024 532 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 RAB3BP20337 219 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 HIST1H1TP22492 207 aaPredicted RBP11.02□□□□□ -0.65
COPA-202ENST00000368069 ACTA2P62736 377 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 ACTG2P63267 376 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 MLLT11Q13015 90 aaPredicted RBP11.02□□□□□ -0.65
COPA-202ENST00000368069 PRAMEF17Q5VTA0 474 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 VRK2Q86Y07 508 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 MS4A15Q8N5U1 240 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 OR5M3Q8NGP4 307 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 SGCDQ92629 289 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 SRA1Q9HD15 236 aaKnown RBP11.02□□□□□ -0.65
COPA-202ENST00000368069 PRODH2Q9UF12 536 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 SPEF1Q9Y4P9 236 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 COL11A2P13942 1736 aaPredicted RBP11.02□□□□□ -0.65
COPA-202ENST00000368069 NPIPA5A0A0B4J1W7 369 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 A8MU76 341 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 NPIPA7E9PJI5 369 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 KCNJ13O60928 360 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 AHSA1O95433 338 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 NPIPA8P0DM63 369 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 NTSR1P30989 418 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 MMP12P39900 470 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 GP2P55259 537 aaKnown RBP11.02□□□□□ -0.65
COPA-202ENST00000368069 SNTB2Q13425 540 aaKnown RBP11.02□□□□□ -0.65
COPA-202ENST00000368069 TMEM69Q5SWH9 247 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 ARHGAP40Q5TG30 622 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 OR2G6Q5TZ20 316 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 SYNPOQ8N3V7 929 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 MRPL43Q8N983 215 aaKnown RBP11.02□□□□□ -0.65
COPA-202ENST00000368069 C17orf50Q8WW18 174 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 KLHDC7BQ96G42 594 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 PTCHD1Q96NR3 888 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 OR5M11Q96RB7 305 aa11.02□□□□□ -0.65
COPA-202ENST00000368069 PITHD1Q9GZP4 211 aaPredicted RBP11.02□□□□□ -0.65
COPA-202ENST00000368069 ACSS1Q9NUB1 689 aaPredicted RBP11.02□□□□□ -0.65
COPA-202ENST00000368069 DNMT3AQ9Y6K1 912 aaPredicted RBP11.02□□□□□ -0.65
COPA-202ENST00000368069 OR2A25A4D2G3 310 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms