RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 MCCC2Q9HCC0 563 aa18.49■□□□□ 0.55
TRIM58-201ENST00000366481 IMP3Q9NV31 184 aaKnown RBP18.49■□□□□ 0.55
TRIM58-201ENST00000366481 SEC14L3Q9UDX4 400 aa18.49■□□□□ 0.55
TRIM58-201ENST00000366481 F5P12259 2224 aa18.48■□□□□ 0.55
TRIM58-201ENST00000366481 PPM1DO15297 605 aa18.48■□□□□ 0.55
TRIM58-201ENST00000366481 HLA-DPB1P04440 258 aa18.48■□□□□ 0.55
TRIM58-201ENST00000366481 PUM1Q14671 1186 aaKnown RBP eCLIP18.48■□□□□ 0.55
TRIM58-201ENST00000366481 QSOX2Q6ZRP7 698 aa18.48■□□□□ 0.55
TRIM58-201ENST00000366481 FNDC11Q9BVV2 318 aa18.48■□□□□ 0.55
TRIM58-201ENST00000366481 NT5DC2Q9H857 520 aa18.48■□□□□ 0.55
TRIM58-201ENST00000366481 SLAMF7Q9NQ25 335 aa18.48■□□□□ 0.55
TRIM58-201ENST00000366481 REV1Q9UBZ9 1251 aa18.48■□□□□ 0.55
TRIM58-201ENST00000366481 BAIAP2Q9UQB8 552 aa18.48■□□□□ 0.55
TRIM58-201ENST00000366481 CACNG2Q9Y698 323 aa18.48■□□□□ 0.55
TRIM58-201ENST00000366481 FGF18O76093 207 aa18.48■□□□□ 0.55
TRIM58-201ENST00000366481 CD3GP09693 182 aa18.48■□□□□ 0.55
TRIM58-201ENST00000366481 KELP23276 732 aa18.48■□□□□ 0.55
TRIM58-201ENST00000366481 ELAVL4P26378 380 aaKnown RBP18.48■□□□□ 0.55
TRIM58-201ENST00000366481 GABRA5P31644 462 aa18.48■□□□□ 0.55
TRIM58-201ENST00000366481 TSPAN5P62079 268 aa18.48■□□□□ 0.55
TRIM58-201ENST00000366481 MLLT1Q03111 559 aaPredicted RBP18.48■□□□□ 0.55
TRIM58-201ENST00000366481 LGALSLQ3ZCW2 172 aaPredicted RBP18.48■□□□□ 0.55
TRIM58-201ENST00000366481 MPP7Q5T2T1 576 aa18.48■□□□□ 0.55
TRIM58-201ENST00000366481 GPR139Q6DWJ6 353 aa18.48■□□□□ 0.55
TRIM58-201ENST00000366481 REEP3Q6NUK4 255 aa18.48■□□□□ 0.55
TRIM58-201ENST00000366481 IQCHQ86VS3 1027 aa18.48■□□□□ 0.55
TRIM58-201ENST00000366481 MARVELD3Q96A59 401 aa18.48■□□□□ 0.55
TRIM58-201ENST00000366481 RSPO3Q9BXY4 272 aaPredicted RBP18.48■□□□□ 0.55
TRIM58-201ENST00000366481 C1GALT1Q9NS00 363 aa18.48■□□□□ 0.55
TRIM58-201ENST00000366481 PPIL1Q9Y3C6 166 aa18.48■□□□□ 0.55
TRIM58-201ENST00000366481 DYRK1BQ9Y463 629 aa18.48■□□□□ 0.55
TRIM58-201ENST00000366481 ATG2BQ96BY7 2078 aa18.48■□□□□ 0.55
TRIM58-201ENST00000366481 PRR23D1E9PI22 279 aaPredicted RBP18.47■□□□□ 0.55
TRIM58-201ENST00000366481 SLC16A5O15375 505 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 C1orf105O95561 183 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 PRR23D2P0DMB1 279 aaPredicted RBP18.47■□□□□ 0.55
TRIM58-201ENST00000366481 PSMB5P28074 263 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 MTNR1AP48039 350 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 CCR6P51684 374 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 MAP4K2Q12851 820 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 PARS2Q7L3T8 475 aaKnown RBP18.47■□□□□ 0.55
TRIM58-201ENST00000366481 HDDC2Q7Z4H3 204 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 OR8K5Q8NH50 307 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 FCRL1Q96LA6 429 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 CACNG6Q9BXT2 260 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 GSX2Q9BZM3 304 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 PLXNB3Q9ULL4 1909 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 REV3LO60673 3130 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 GABRPO00591 440 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 MMP20O60882 483 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 FURINP09958 794 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 SYN1P17600 705 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 ITGB8P26012 769 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 GIPRP48546 466 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 SPIN4Q56A73 249 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 PLPP4Q5VZY2 271 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 GET4Q7L5D6 327 aaPredicted RBP18.47■□□□□ 0.55
TRIM58-201ENST00000366481 TOMM5Q8N4H5 51 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 OR4F15Q8NGB8 312 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 EXOSC8Q96B26 276 aaKnown RBP18.47■□□□□ 0.55
TRIM58-201ENST00000366481 F2RL3Q96RI0 385 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 TBX5Q99593 518 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 YIPF4Q9BSR8 244 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 CXorf36Q9H7Y0 433 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 ASF1AQ9Y294 204 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 SLC5A10A0PJK1 596 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 RNASET2O00584 256 aaKnown RBP18.47■□□□□ 0.55
TRIM58-201ENST00000366481 HRO43593 1189 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 EPHX1P07099 455 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 HMGA2P52926 109 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 NUMA1Q14980 2115 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 RRM2BQ7LG56 351 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 MS4A15Q8N5U1 240 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 COQ8AQ8NI60 647 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 SLC7A13Q8TCU3 470 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 LINC00052Q96N35 136 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 ERMAPQ96PL5 475 aaPredicted RBP18.47■□□□□ 0.55
TRIM58-201ENST00000366481 MVB12BQ9H7P6 319 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 DMRT3Q9NQL9 472 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 TM7SF3Q9NS93 570 aa18.47■□□□□ 0.55
TRIM58-201ENST00000366481 GLOD5A6NK44 160 aa18.46■□□□□ 0.55
TRIM58-201ENST00000366481 SLC9A3R1O14745 358 aaPredicted RBP18.46■□□□□ 0.55
TRIM58-201ENST00000366481 KLHL18O94889 574 aa18.46■□□□□ 0.55
TRIM58-201ENST00000366481 MPC2O95563 127 aa18.46■□□□□ 0.55
TRIM58-201ENST00000366481 PROS1P07225 676 aa18.46■□□□□ 0.55
TRIM58-201ENST00000366481 SLC6A1P30531 599 aa18.46■□□□□ 0.55
TRIM58-201ENST00000366481 PGBD2Q6P3X8 592 aa18.46■□□□□ 0.55
TRIM58-201ENST00000366481 METAP1DQ6UB28 335 aaPredicted RBP18.46■□□□□ 0.55
TRIM58-201ENST00000366481 KLBQ86Z14 1044 aa18.46■□□□□ 0.55
TRIM58-201ENST00000366481 OR5AR1Q8NGP9 310 aa18.46■□□□□ 0.55
TRIM58-201ENST00000366481 OR56A3Q8NH54 315 aa18.46■□□□□ 0.55
TRIM58-201ENST00000366481 PAWRQ96IZ0 340 aaKnown RBP18.46■□□□□ 0.55
TRIM58-201ENST00000366481 SPHK2Q9NRA0 654 aa18.46■□□□□ 0.55
TRIM58-201ENST00000366481 OR6C2Q9NZP2 312 aa18.46■□□□□ 0.55
TRIM58-201ENST00000366481 KLHL42Q9P2K6 505 aa18.46■□□□□ 0.55
TRIM58-201ENST00000366481 TOR1AO14656 332 aa18.46■□□□□ 0.55
TRIM58-201ENST00000366481 LATO43561 262 aa18.46■□□□□ 0.55
TRIM58-201ENST00000366481 PRKRAO75569 313 aaKnown RBP18.46■□□□□ 0.55
TRIM58-201ENST00000366481 PLATP00750 562 aa18.46■□□□□ 0.55
TRIM58-201ENST00000366481 TAP2Q03519 686 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms