RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 PUDPQ08623 228 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 HES5Q5TA89 166 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 UNC5DQ6UXZ4 953 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 GLCCI1Q86VQ1 547 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 COMMD7Q86VX2 200 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 MED20Q9H944 212 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 ACER3Q9NUN7 267 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 ZNF879B4DU55 563 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 M0R082 166 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 PRKYO43930 277 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 ETHE1O95571 254 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 DDCP20711 480 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 FAPQ12884 760 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 TAF13Q15543 124 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 KLHDC8AQ8IYD2 350 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 SLC7A13Q8TCU3 470 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 THEM6Q8WUY1 208 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 ASB12Q8WXK4 309 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 CREB3L1Q96BA8 519 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 S100A16Q96FQ6 103 aaKnown RBP13.13□□□□□ -0.31
COL6A1-201ENST00000361866 COQ10AQ96MF6 247 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 RNF186Q9NXI6 227 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 MLXQ9UH92 298 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 POM121CA8CG34 1229 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 ICMTO60725 284 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 PRKRAO75569 313 aaKnown RBP13.13□□□□□ -0.31
COL6A1-201ENST00000361866 ITGA10O75578 1167 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 RAB3BP20337 219 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 IGFBP4P22692 258 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 SNTA1Q13424 505 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 HSD17B12Q53GQ0 312 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 ENPP7Q6UWV6 458 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 LINC00299Q6ZSB3 139 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 UBQLNLQ8IYU4 475 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 PXYLP1Q8TE99 480 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 PMEPA1Q969W9 287 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 FKBP10Q96AY3 582 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 SLC25A36Q96CQ1 311 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 GON7Q9BXV9 100 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 OR6C2Q9NZP2 312 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 USP36Q9P275 1121 aaKnown RBP13.13□□□□□ -0.31
COL6A1-201ENST00000361866 MBD2Q9UBB5 411 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 RGS9O75916 674 aaPredicted RBP13.12□□□□□ -0.31
COL6A1-201ENST00000361866 VAMP1P23763 118 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 TP53I3Q53FA7 332 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 C8orf82Q6P1X6 216 aaPredicted RBP13.12□□□□□ -0.31
COL6A1-201ENST00000361866 NLGN4YQ8NFZ3 816 aaPredicted RBP13.12□□□□□ -0.31
COL6A1-201ENST00000361866 MOSPD2Q8NHP6 518 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 ELMOD3Q96FG2 381 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 EXO5Q9H790 373 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 CKLFQ9UBR5 152 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 FARSAQ9Y285 508 aaKnown RBP13.12□□□□□ -0.31
COL6A1-201ENST00000361866 GATBO75879 557 aaKnown RBP13.12□□□□□ -0.31
COL6A1-201ENST00000361866 FGF18O76093 207 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 ARSBP15848 533 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 ITGA3P26006 1051 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 PITPNBP48739 271 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 SKP1P63208 163 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 SF3A2Q15428 464 aaKnown RBP13.12□□□□□ -0.31
COL6A1-201ENST00000361866 ZNF385BQ569K4 471 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 GARNL3Q5VVW2 1013 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 C17orf99Q6UX52 265 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 VRK2Q86Y07 508 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 ADAMTS19Q8TE59 1207 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 ZMYND19Q96E35 227 aaPredicted RBP13.12□□□□□ -0.31
COL6A1-201ENST00000361866 COMMD4Q9H0A8 199 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 SLC6A15Q9H2J7 730 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 ZNF334Q9HCZ1 680 aaPredicted RBP13.12□□□□□ -0.31
COL6A1-201ENST00000361866 RBFOX1Q9NWB1 397 aaKnown RBP13.12□□□□□ -0.31
COL6A1-201ENST00000361866 ZNF226Q9NYT6 803 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 MRPS33Q9Y291 106 aaKnown RBP13.12□□□□□ -0.31
COL6A1-201ENST00000361866 ANTXRLA6NF34 631 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 OR52A4PA6NMU1 304 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 H0YIV9 168 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 GNRH1P01148 92 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 FURINP09958 794 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 PRKACAP17612 351 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 CCDC58Q4VC31 144 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 CCNJQ5T5M9 372 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 RPTNQ6XPR3 784 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 FATE1Q969F0 183 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 OR51J1Q9H342 316 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 CARNS1A5YM72 827 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 TMEM189-UBE2V1I3L0A0 370 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 GABRPO00591 440 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 RFPL3O75679 317 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 PCMT1P22061 227 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 AK4P27144 223 aaPredicted RBP13.12□□□□□ -0.31
COL6A1-201ENST00000361866 OC90Q02509 493 aaPredicted RBP13.12□□□□□ -0.31
COL6A1-201ENST00000361866 FCN2Q15485 313 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 GGTA1PQ4G0N0 100 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 TMEM69Q5SWH9 247 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 OR4C11Q6IEV9 310 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 SLCO4C1Q6ZQN7 724 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 PAQR7Q86WK9 346 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 PLCZ1Q86YW0 608 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 GID4Q8IVV7 300 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 FAM109AQ8N4B1 249 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 OR52E2Q8NGJ4 325 aa13.12□□□□□ -0.31
COL6A1-201ENST00000361866 ZNF566Q969W8 418 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms