RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 DAZLQ92904 295 aaKnown RBP16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 CIB1Q99828 191 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 WDR77Q9BQA1 342 aaPredicted RBP16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 NTN4Q9HB63 628 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 C8orf4Q9NR00 106 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 PADI1Q9ULC6 663 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 GPC6Q9Y625 555 aaPredicted RBP16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 DSPPQ9NZW4 1301 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 SYNDIG1LA6NDD5 238 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 DYRK3O43781 588 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 FCMRO60667 390 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 MFN2O95140 757 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 TNFSF15O95150 251 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 CST1P01037 141 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 CYC1P08574 325 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 ACADSP16219 412 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 GPR143P51810 404 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 CHRNEQ04844 493 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 CCNJQ5T5M9 372 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 PPP4R4Q6NUP7 873 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 EPHX4Q8IUS5 362 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 PACRGLQ8N7B6 248 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 COX18Q8N8Q8 333 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 SMYD1Q8NB12 490 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 CHDHQ8NE62 594 aaPredicted RBP16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 NFAM1Q8NET5 270 aaPredicted RBP16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 METTL21AQ8WXB1 218 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 TPD52L3Q96J77 140 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 C7orf34Q96L11 122 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 COL21A1Q96P44 957 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 ZNF607Q96SK3 696 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 SDF2Q99470 211 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 C9orf16Q9BUW7 83 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 ITPAQ9BY32 194 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 COQ10BQ9H8M1 238 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 OAZ3Q9UMX2 235 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 PADI2Q9Y2J8 665 aa16.84■□□□□ 0.29
SMARCD3-202ENST00000356800 PTPRZ1P23471 2315 aaPredicted RBP16.83■□□□□ 0.29
SMARCD3-202ENST00000356800 A0A0G2JPF8 293 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 HNRNPCL2B2RXH8 293 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 HNRNPCL3B7ZW38 293 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 SLC30A4O14863 429 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 ACOX3O15254 700 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 FABP3P05413 133 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 HNRNPCL4P0DMR1 293 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 CT45A8P0DMV1 189 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 CT45A9P0DMV2 189 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 CD247P20963 164 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 AQP4P55087 323 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 TAF11Q15544 211 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 CT45A2Q5DJT8 189 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 TMEM164Q5U3C3 297 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 FRRS1Q6ZNA5 592 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 ZBTB49Q6ZSB9 765 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 HMGN2P46Q86SG4 172 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 ARMC8Q8IUR7 673 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 MORN4Q8NDC4 146 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 OR4N2Q8NGD1 307 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 OR1N1Q8NGS0 311 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 CT55Q8WUE5 264 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 C8orf44Q96CB5 159 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 ZG16BQ96DA0 208 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 BTBD9Q96Q07 612 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 BTBD2Q9BX70 525 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 FBXO34Q9NWN3 711 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 PRODH2Q9UF12 536 aa16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 PTRH2Q9Y3E5 179 aaKnown RBP16.83■□□□□ 0.28
SMARCD3-202ENST00000356800 PRKNO60260 465 aaPredicted RBP16.82■□□□□ 0.28
SMARCD3-202ENST00000356800 DPM1O60762 260 aa16.82■□□□□ 0.28
SMARCD3-202ENST00000356800 SERPINB7O75635 380 aa16.82■□□□□ 0.28
SMARCD3-202ENST00000356800 SOX30O94993 753 aa16.82■□□□□ 0.28
SMARCD3-202ENST00000356800 ETS2P15036 469 aa16.82■□□□□ 0.28
SMARCD3-202ENST00000356800 ATP6V1C1P21283 382 aa16.82■□□□□ 0.28
SMARCD3-202ENST00000356800 VLDLRP98155 873 aa16.82■□□□□ 0.28
SMARCD3-202ENST00000356800 ZNHIT3Q15649 155 aaPredicted RBP16.82■□□□□ 0.28
SMARCD3-202ENST00000356800 DUSP7Q16829 419 aa16.82■□□□□ 0.28
SMARCD3-202ENST00000356800 CYP27C1Q4G0S4 372 aa16.82■□□□□ 0.28
SMARCD3-202ENST00000356800 IQCCQ4KMZ1 466 aa16.82■□□□□ 0.28
SMARCD3-202ENST00000356800 IFI44LQ53G44 452 aa16.82■□□□□ 0.28
SMARCD3-202ENST00000356800 DCST2Q5T1A1 773 aa16.82■□□□□ 0.28
SMARCD3-202ENST00000356800 CPEB2Q7Z5Q1 589 aaKnown RBP16.82■□□□□ 0.28
SMARCD3-202ENST00000356800 GPR32P1Q8NGA4 272 aa16.82■□□□□ 0.28
SMARCD3-202ENST00000356800 OR2Y1Q8NGV0 311 aa16.82■□□□□ 0.28
SMARCD3-202ENST00000356800 RASSF5Q8WWW0 418 aa16.82■□□□□ 0.28
SMARCD3-202ENST00000356800 SLC46A1Q96NT5 459 aa16.82■□□□□ 0.28
SMARCD3-202ENST00000356800 ZNF350Q9GZX5 532 aa16.82■□□□□ 0.28
SMARCD3-202ENST00000356800 QRSL1Q9H0R6 528 aaKnown RBP16.82■□□□□ 0.28
SMARCD3-202ENST00000356800 CALML5Q9NZT1 146 aa16.82■□□□□ 0.28
SMARCD3-202ENST00000356800 PCDHGB3Q9Y5G1 929 aa16.82■□□□□ 0.28
SMARCD3-202ENST00000356800 PRAMEF25A6NGN4 478 aa16.81■□□□□ 0.28
SMARCD3-202ENST00000356800 SAGE2PA6NJ88 616 aa16.81■□□□□ 0.28
SMARCD3-202ENST00000356800 SAC3D1A6NKF1 404 aa16.81■□□□□ 0.28
SMARCD3-202ENST00000356800 BRINP1O60477 761 aa16.81■□□□□ 0.28
SMARCD3-202ENST00000356800 KCNK2O95069 426 aa16.81■□□□□ 0.28
SMARCD3-202ENST00000356800 CCNYL3P0C7X3 344 aa16.81■□□□□ 0.28
SMARCD3-202ENST00000356800 TNFRSF1BP20333 461 aa16.81■□□□□ 0.28
SMARCD3-202ENST00000356800 POU6F2P78424 691 aaPredicted RBP16.81■□□□□ 0.28
SMARCD3-202ENST00000356800 NNATQ16517 81 aa16.81■□□□□ 0.28
SMARCD3-202ENST00000356800 TYW3Q6IPR3 259 aaKnown RBP16.81■□□□□ 0.28
SMARCD3-202ENST00000356800 KRT73Q86Y46 540 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms